2024-06-20T16:38:01,380 Created temporary directory: /tmp/pip-build-tracker-fd1fvx6h
2024-06-20T16:38:01,381 Initialized build tracking at /tmp/pip-build-tracker-fd1fvx6h
2024-06-20T16:38:01,382 Created build tracker: /tmp/pip-build-tracker-fd1fvx6h
2024-06-20T16:38:01,382 Entered build tracker: /tmp/pip-build-tracker-fd1fvx6h
2024-06-20T16:38:01,383 Created temporary directory: /tmp/pip-wheel-_qv50g3_
2024-06-20T16:38:01,386 Created temporary directory: /tmp/pip-ephem-wheel-cache-qawa9kx8
2024-06-20T16:38:01,411 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2024-06-20T16:38:01,414 2 location(s) to search for versions of kegg-pathways-completeness:
2024-06-20T16:38:01,414 * https://pypi.org/simple/kegg-pathways-completeness/
2024-06-20T16:38:01,414 * https://www.piwheels.org/simple/kegg-pathways-completeness/
2024-06-20T16:38:01,415 Fetching project page and analyzing links: https://pypi.org/simple/kegg-pathways-completeness/
2024-06-20T16:38:01,416 Getting page https://pypi.org/simple/kegg-pathways-completeness/
2024-06-20T16:38:01,417 Found index url https://pypi.org/simple/
2024-06-20T16:38:01,631 Fetched page https://pypi.org/simple/kegg-pathways-completeness/ as application/vnd.pypi.simple.v1+json
2024-06-20T16:38:01,632   Skipping link: No binaries permitted for kegg-pathways-completeness: https://files.pythonhosted.org/packages/dc/51/e6f9173867d01880a1e0f253fa087d9b278b6d306d428d3dc001cf040de2/kegg_pathways_completeness-1.0.1-py3-none-any.whl (from https://pypi.org/simple/kegg-pathways-completeness/) (requires-python:>=3.9)
2024-06-20T16:38:01,633   Found link https://files.pythonhosted.org/packages/0d/e3/4805c1c5a869edbf692bec1dacdda820f8499016be58c639fa170bf01be6/kegg_pathways_completeness-1.0.1.tar.gz (from https://pypi.org/simple/kegg-pathways-completeness/) (requires-python:>=3.9), version: 1.0.1
2024-06-20T16:38:01,634 Fetching project page and analyzing links: https://www.piwheels.org/simple/kegg-pathways-completeness/
2024-06-20T16:38:01,634 Getting page https://www.piwheels.org/simple/kegg-pathways-completeness/
2024-06-20T16:38:01,636 Found index url https://www.piwheels.org/simple/
2024-06-20T16:38:01,793 Fetched page https://www.piwheels.org/simple/kegg-pathways-completeness/ as text/html
2024-06-20T16:38:01,795 Skipping link: not a file: https://www.piwheels.org/simple/kegg-pathways-completeness/
2024-06-20T16:38:01,795 Skipping link: not a file: https://pypi.org/simple/kegg-pathways-completeness/
2024-06-20T16:38:01,814 Given no hashes to check 1 links for project 'kegg-pathways-completeness': discarding no candidates
2024-06-20T16:38:01,831 Collecting kegg-pathways-completeness==1.0.1
2024-06-20T16:38:01,834   Created temporary directory: /tmp/pip-unpack-86722xqx
2024-06-20T16:38:02,039   Downloading kegg_pathways_completeness-1.0.1.tar.gz (20 kB)
2024-06-20T16:38:02,105   Added kegg-pathways-completeness==1.0.1 from https://files.pythonhosted.org/packages/0d/e3/4805c1c5a869edbf692bec1dacdda820f8499016be58c639fa170bf01be6/kegg_pathways_completeness-1.0.1.tar.gz to build tracker '/tmp/pip-build-tracker-fd1fvx6h'
2024-06-20T16:38:02,110   Created temporary directory: /tmp/pip-build-env-euasya5a
2024-06-20T16:38:02,114   Installing build dependencies: started
2024-06-20T16:38:02,115   Running command pip subprocess to install build dependencies
2024-06-20T16:38:03,234   Using pip 24.0 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11)
2024-06-20T16:38:03,754   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2024-06-20T16:38:05,190   Collecting setuptools>=61.0
2024-06-20T16:38:05,205     Using cached https://www.piwheels.org/simple/setuptools/setuptools-70.1.0-py3-none-any.whl (882 kB)
2024-06-20T16:38:07,824   Installing collected packages: setuptools
2024-06-20T16:38:10,259   Successfully installed setuptools-70.1.0
2024-06-20T16:38:10,824   Installing build dependencies: finished with status 'done'
2024-06-20T16:38:10,827   Getting requirements to build wheel: started
2024-06-20T16:38:10,828   Running command Getting requirements to build wheel
2024-06-20T16:38:11,658   running egg_info
2024-06-20T16:38:11,661   writing kegg_pathways_completeness.egg-info/PKG-INFO
2024-06-20T16:38:11,667   writing dependency_links to kegg_pathways_completeness.egg-info/dependency_links.txt
2024-06-20T16:38:11,669   writing entry points to kegg_pathways_completeness.egg-info/entry_points.txt
2024-06-20T16:38:11,672   writing requirements to kegg_pathways_completeness.egg-info/requires.txt
2024-06-20T16:38:11,673   writing top-level names to kegg_pathways_completeness.egg-info/top_level.txt
2024-06-20T16:38:11,696   reading manifest file 'kegg_pathways_completeness.egg-info/SOURCES.txt'
2024-06-20T16:38:11,698   adding license file 'LICENSE'
2024-06-20T16:38:11,701   writing manifest file 'kegg_pathways_completeness.egg-info/SOURCES.txt'
2024-06-20T16:38:11,816   Getting requirements to build wheel: finished with status 'done'
2024-06-20T16:38:11,820   Created temporary directory: /tmp/pip-modern-metadata-95ml_wlo
2024-06-20T16:38:11,822   Preparing metadata (pyproject.toml): started
2024-06-20T16:38:11,824   Running command Preparing metadata (pyproject.toml)
2024-06-20T16:38:12,571   running dist_info
2024-06-20T16:38:12,576   creating /tmp/pip-modern-metadata-95ml_wlo/kegg_pathways_completeness.egg-info
2024-06-20T16:38:12,580   writing /tmp/pip-modern-metadata-95ml_wlo/kegg_pathways_completeness.egg-info/PKG-INFO
2024-06-20T16:38:12,586   writing dependency_links to /tmp/pip-modern-metadata-95ml_wlo/kegg_pathways_completeness.egg-info/dependency_links.txt
2024-06-20T16:38:12,588   writing entry points to /tmp/pip-modern-metadata-95ml_wlo/kegg_pathways_completeness.egg-info/entry_points.txt
2024-06-20T16:38:12,591   writing requirements to /tmp/pip-modern-metadata-95ml_wlo/kegg_pathways_completeness.egg-info/requires.txt
2024-06-20T16:38:12,592   writing top-level names to /tmp/pip-modern-metadata-95ml_wlo/kegg_pathways_completeness.egg-info/top_level.txt
2024-06-20T16:38:12,593   writing manifest file '/tmp/pip-modern-metadata-95ml_wlo/kegg_pathways_completeness.egg-info/SOURCES.txt'
2024-06-20T16:38:12,609   reading manifest file '/tmp/pip-modern-metadata-95ml_wlo/kegg_pathways_completeness.egg-info/SOURCES.txt'
2024-06-20T16:38:12,612   adding license file 'LICENSE'
2024-06-20T16:38:12,614   writing manifest file '/tmp/pip-modern-metadata-95ml_wlo/kegg_pathways_completeness.egg-info/SOURCES.txt'
2024-06-20T16:38:12,615   creating '/tmp/pip-modern-metadata-95ml_wlo/kegg_pathways_completeness-1.0.1.dist-info'
2024-06-20T16:38:12,760   Preparing metadata (pyproject.toml): finished with status 'done'
2024-06-20T16:38:12,765   Source in /tmp/pip-wheel-_qv50g3_/kegg-pathways-completeness_5b9fb3d5dad1460e8d9b869db34f47a3 has version 1.0.1, which satisfies requirement kegg-pathways-completeness==1.0.1 from https://files.pythonhosted.org/packages/0d/e3/4805c1c5a869edbf692bec1dacdda820f8499016be58c639fa170bf01be6/kegg_pathways_completeness-1.0.1.tar.gz
2024-06-20T16:38:12,766   Removed kegg-pathways-completeness==1.0.1 from https://files.pythonhosted.org/packages/0d/e3/4805c1c5a869edbf692bec1dacdda820f8499016be58c639fa170bf01be6/kegg_pathways_completeness-1.0.1.tar.gz from build tracker '/tmp/pip-build-tracker-fd1fvx6h'
2024-06-20T16:38:12,771 Created temporary directory: /tmp/pip-unpack-92jr3u1r
2024-06-20T16:38:12,772 Created temporary directory: /tmp/pip-unpack-vllhoadc
2024-06-20T16:38:12,794 Building wheels for collected packages: kegg-pathways-completeness
2024-06-20T16:38:12,798   Created temporary directory: /tmp/pip-wheel-i9bd81q3
2024-06-20T16:38:12,799   Destination directory: /tmp/pip-wheel-i9bd81q3
2024-06-20T16:38:12,801   Building wheel for kegg-pathways-completeness (pyproject.toml): started
2024-06-20T16:38:12,803   Running command Building wheel for kegg-pathways-completeness (pyproject.toml)
2024-06-20T16:38:13,515   running bdist_wheel
2024-06-20T16:38:13,529   running build
2024-06-20T16:38:13,530   running build_py
2024-06-20T16:38:13,533   creating build
2024-06-20T16:38:13,534   creating build/lib
2024-06-20T16:38:13,535   creating build/lib/kegg_pathways_completeness
2024-06-20T16:38:13,536   copying kegg_pathways_completeness/__init__.py -> build/lib/kegg_pathways_completeness
2024-06-20T16:38:13,539   creating build/lib/kegg_pathways_completeness/bin
2024-06-20T16:38:13,540   copying kegg_pathways_completeness/bin/__init__.py -> build/lib/kegg_pathways_completeness/bin
2024-06-20T16:38:13,541   copying kegg_pathways_completeness/bin/plot_completeness_graphs.py -> build/lib/kegg_pathways_completeness/bin
2024-06-20T16:38:13,543   copying kegg_pathways_completeness/bin/give_pathways.py -> build/lib/kegg_pathways_completeness/bin
2024-06-20T16:38:13,546   creating build/lib/kegg_pathways_completeness/bin/generate_hmmtable
2024-06-20T16:38:13,547   copying kegg_pathways_completeness/bin/generate_hmmtable/hmmscan_tab.py -> build/lib/kegg_pathways_completeness/bin/generate_hmmtable
2024-06-20T16:38:13,548   copying kegg_pathways_completeness/bin/generate_hmmtable/__init__.py -> build/lib/kegg_pathways_completeness/bin/generate_hmmtable
2024-06-20T16:38:13,550   copying kegg_pathways_completeness/bin/generate_hmmtable/parsing_hmmscan.py -> build/lib/kegg_pathways_completeness/bin/generate_hmmtable
2024-06-20T16:38:13,552   creating build/lib/kegg_pathways_completeness/bin/make_graphs
2024-06-20T16:38:13,553   copying kegg_pathways_completeness/bin/make_graphs/get_dot.py -> build/lib/kegg_pathways_completeness/bin/make_graphs
2024-06-20T16:38:13,554   copying kegg_pathways_completeness/bin/make_graphs/__init__.py -> build/lib/kegg_pathways_completeness/bin/make_graphs
2024-06-20T16:38:13,556   copying kegg_pathways_completeness/bin/make_graphs/make_graphs.py -> build/lib/kegg_pathways_completeness/bin/make_graphs
2024-06-20T16:38:13,558   copying kegg_pathways_completeness/bin/make_graphs/plot.py -> build/lib/kegg_pathways_completeness/bin/make_graphs
2024-06-20T16:38:13,560   creating build/lib/kegg_pathways_completeness/bin/update_pathways_data
2024-06-20T16:38:13,561   copying kegg_pathways_completeness/bin/update_pathways_data/check_list_pathways.py -> build/lib/kegg_pathways_completeness/bin/update_pathways_data
2024-06-20T16:38:13,562   copying kegg_pathways_completeness/bin/update_pathways_data/create.py -> build/lib/kegg_pathways_completeness/bin/update_pathways_data
2024-06-20T16:38:13,564   copying kegg_pathways_completeness/bin/update_pathways_data/get_modules_list.py -> build/lib/kegg_pathways_completeness/bin/update_pathways_data
2024-06-20T16:38:13,566   copying kegg_pathways_completeness/bin/update_pathways_data/__init__.py -> build/lib/kegg_pathways_completeness/bin/update_pathways_data
2024-06-20T16:38:13,568   creating build/lib/kegg_pathways_completeness/graphs
2024-06-20T16:38:13,569   copying kegg_pathways_completeness/graphs/__init__.py -> build/lib/kegg_pathways_completeness/graphs
2024-06-20T16:38:13,571   creating build/lib/kegg_pathways_completeness/pathways_data
2024-06-20T16:38:13,572   copying kegg_pathways_completeness/pathways_data/__init__.py -> build/lib/kegg_pathways_completeness/pathways_data
2024-06-20T16:38:13,573   running egg_info
2024-06-20T16:38:13,576   writing kegg_pathways_completeness.egg-info/PKG-INFO
2024-06-20T16:38:13,581   writing dependency_links to kegg_pathways_completeness.egg-info/dependency_links.txt
2024-06-20T16:38:13,583   writing entry points to kegg_pathways_completeness.egg-info/entry_points.txt
2024-06-20T16:38:13,586   writing requirements to kegg_pathways_completeness.egg-info/requires.txt
2024-06-20T16:38:13,587   writing top-level names to kegg_pathways_completeness.egg-info/top_level.txt
2024-06-20T16:38:13,598   reading manifest file 'kegg_pathways_completeness.egg-info/SOURCES.txt'
2024-06-20T16:38:13,600   adding license file 'LICENSE'
2024-06-20T16:38:13,602   writing manifest file 'kegg_pathways_completeness.egg-info/SOURCES.txt'
2024-06-20T16:38:13,614   installing to build/bdist.linux-armv7l/wheel
2024-06-20T16:38:13,615   running install
2024-06-20T16:38:13,639   running install_lib
2024-06-20T16:38:13,643   creating build/bdist.linux-armv7l
2024-06-20T16:38:13,643   creating build/bdist.linux-armv7l/wheel
2024-06-20T16:38:13,645   creating build/bdist.linux-armv7l/wheel/kegg_pathways_completeness
2024-06-20T16:38:13,647   creating build/bdist.linux-armv7l/wheel/kegg_pathways_completeness/graphs
2024-06-20T16:38:13,647   copying build/lib/kegg_pathways_completeness/graphs/__init__.py -> build/bdist.linux-armv7l/wheel/kegg_pathways_completeness/graphs
2024-06-20T16:38:13,649   copying build/lib/kegg_pathways_completeness/__init__.py -> build/bdist.linux-armv7l/wheel/kegg_pathways_completeness
2024-06-20T16:38:13,650   creating build/bdist.linux-armv7l/wheel/kegg_pathways_completeness/pathways_data
2024-06-20T16:38:13,651   copying build/lib/kegg_pathways_completeness/pathways_data/__init__.py -> build/bdist.linux-armv7l/wheel/kegg_pathways_completeness/pathways_data
2024-06-20T16:38:13,653   creating build/bdist.linux-armv7l/wheel/kegg_pathways_completeness/bin
2024-06-20T16:38:13,654   creating build/bdist.linux-armv7l/wheel/kegg_pathways_completeness/bin/update_pathways_data
2024-06-20T16:38:13,655   copying build/lib/kegg_pathways_completeness/bin/update_pathways_data/check_list_pathways.py -> build/bdist.linux-armv7l/wheel/kegg_pathways_completeness/bin/update_pathways_data
2024-06-20T16:38:13,657   copying build/lib/kegg_pathways_completeness/bin/update_pathways_data/create.py -> build/bdist.linux-armv7l/wheel/kegg_pathways_completeness/bin/update_pathways_data
2024-06-20T16:38:13,659   copying build/lib/kegg_pathways_completeness/bin/update_pathways_data/get_modules_list.py -> build/bdist.linux-armv7l/wheel/kegg_pathways_completeness/bin/update_pathways_data
2024-06-20T16:38:13,661   copying build/lib/kegg_pathways_completeness/bin/update_pathways_data/__init__.py -> build/bdist.linux-armv7l/wheel/kegg_pathways_completeness/bin/update_pathways_data
2024-06-20T16:38:13,663   creating build/bdist.linux-armv7l/wheel/kegg_pathways_completeness/bin/generate_hmmtable
2024-06-20T16:38:13,663   copying build/lib/kegg_pathways_completeness/bin/generate_hmmtable/hmmscan_tab.py -> build/bdist.linux-armv7l/wheel/kegg_pathways_completeness/bin/generate_hmmtable
2024-06-20T16:38:13,665   copying build/lib/kegg_pathways_completeness/bin/generate_hmmtable/__init__.py -> build/bdist.linux-armv7l/wheel/kegg_pathways_completeness/bin/generate_hmmtable
2024-06-20T16:38:13,667   copying build/lib/kegg_pathways_completeness/bin/generate_hmmtable/parsing_hmmscan.py -> build/bdist.linux-armv7l/wheel/kegg_pathways_completeness/bin/generate_hmmtable
2024-06-20T16:38:13,668   copying build/lib/kegg_pathways_completeness/bin/__init__.py -> build/bdist.linux-armv7l/wheel/kegg_pathways_completeness/bin
2024-06-20T16:38:13,670   copying build/lib/kegg_pathways_completeness/bin/plot_completeness_graphs.py -> build/bdist.linux-armv7l/wheel/kegg_pathways_completeness/bin
2024-06-20T16:38:13,672   creating build/bdist.linux-armv7l/wheel/kegg_pathways_completeness/bin/make_graphs
2024-06-20T16:38:13,672   copying build/lib/kegg_pathways_completeness/bin/make_graphs/get_dot.py -> build/bdist.linux-armv7l/wheel/kegg_pathways_completeness/bin/make_graphs
2024-06-20T16:38:13,674   copying build/lib/kegg_pathways_completeness/bin/make_graphs/__init__.py -> build/bdist.linux-armv7l/wheel/kegg_pathways_completeness/bin/make_graphs
2024-06-20T16:38:13,676   copying build/lib/kegg_pathways_completeness/bin/make_graphs/make_graphs.py -> build/bdist.linux-armv7l/wheel/kegg_pathways_completeness/bin/make_graphs
2024-06-20T16:38:13,678   copying build/lib/kegg_pathways_completeness/bin/make_graphs/plot.py -> build/bdist.linux-armv7l/wheel/kegg_pathways_completeness/bin/make_graphs
2024-06-20T16:38:13,680   copying build/lib/kegg_pathways_completeness/bin/give_pathways.py -> build/bdist.linux-armv7l/wheel/kegg_pathways_completeness/bin
2024-06-20T16:38:13,682   running install_egg_info
2024-06-20T16:38:13,686   Copying kegg_pathways_completeness.egg-info to build/bdist.linux-armv7l/wheel/kegg_pathways_completeness-1.0.1-py3.11.egg-info
2024-06-20T16:38:13,697   running install_scripts
2024-06-20T16:38:13,713   creating build/bdist.linux-armv7l/wheel/kegg_pathways_completeness-1.0.1.dist-info/WHEEL
2024-06-20T16:38:13,716   creating '/tmp/pip-wheel-i9bd81q3/.tmp-k39g2mx5/kegg_pathways_completeness-1.0.1-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2024-06-20T16:38:13,718   adding 'kegg_pathways_completeness/__init__.py'
2024-06-20T16:38:13,720   adding 'kegg_pathways_completeness/bin/__init__.py'
2024-06-20T16:38:13,722   adding 'kegg_pathways_completeness/bin/give_pathways.py'
2024-06-20T16:38:13,724   adding 'kegg_pathways_completeness/bin/plot_completeness_graphs.py'
2024-06-20T16:38:13,725   adding 'kegg_pathways_completeness/bin/generate_hmmtable/__init__.py'
2024-06-20T16:38:13,727   adding 'kegg_pathways_completeness/bin/generate_hmmtable/hmmscan_tab.py'
2024-06-20T16:38:13,728   adding 'kegg_pathways_completeness/bin/generate_hmmtable/parsing_hmmscan.py'
2024-06-20T16:38:13,729   adding 'kegg_pathways_completeness/bin/make_graphs/__init__.py'
2024-06-20T16:38:13,731   adding 'kegg_pathways_completeness/bin/make_graphs/get_dot.py'
2024-06-20T16:38:13,732   adding 'kegg_pathways_completeness/bin/make_graphs/make_graphs.py'
2024-06-20T16:38:13,734   adding 'kegg_pathways_completeness/bin/make_graphs/plot.py'
2024-06-20T16:38:13,735   adding 'kegg_pathways_completeness/bin/update_pathways_data/__init__.py'
2024-06-20T16:38:13,737   adding 'kegg_pathways_completeness/bin/update_pathways_data/check_list_pathways.py'
2024-06-20T16:38:13,738   adding 'kegg_pathways_completeness/bin/update_pathways_data/create.py'
2024-06-20T16:38:13,740   adding 'kegg_pathways_completeness/bin/update_pathways_data/get_modules_list.py'
2024-06-20T16:38:13,741   adding 'kegg_pathways_completeness/graphs/__init__.py'
2024-06-20T16:38:13,743   adding 'kegg_pathways_completeness/pathways_data/__init__.py'
2024-06-20T16:38:13,746   adding 'kegg_pathways_completeness-1.0.1.dist-info/LICENSE'
2024-06-20T16:38:13,747   adding 'kegg_pathways_completeness-1.0.1.dist-info/METADATA'
2024-06-20T16:38:13,748   adding 'kegg_pathways_completeness-1.0.1.dist-info/WHEEL'
2024-06-20T16:38:13,749   adding 'kegg_pathways_completeness-1.0.1.dist-info/entry_points.txt'
2024-06-20T16:38:13,750   adding 'kegg_pathways_completeness-1.0.1.dist-info/top_level.txt'
2024-06-20T16:38:13,751   adding 'kegg_pathways_completeness-1.0.1.dist-info/RECORD'
2024-06-20T16:38:13,753   removing build/bdist.linux-armv7l/wheel
2024-06-20T16:38:13,884   Building wheel for kegg-pathways-completeness (pyproject.toml): finished with status 'done'
2024-06-20T16:38:13,888   Created wheel for kegg-pathways-completeness: filename=kegg_pathways_completeness-1.0.1-py3-none-any.whl size=24937 sha256=d16f05d5e20d3b472ead82f7b520e3a655c52d5fbbc7cd4a98be89e085c01577
2024-06-20T16:38:13,890   Stored in directory: /tmp/pip-ephem-wheel-cache-qawa9kx8/wheels/a5/c6/de/c0aea831f207a8efb1a993eee75f2002fb72b71c50eb357fc9
2024-06-20T16:38:13,901 Successfully built kegg-pathways-completeness
2024-06-20T16:38:13,905 Removed build tracker: '/tmp/pip-build-tracker-fd1fvx6h'