2024-06-21T15:19:56,018 Created temporary directory: /tmp/pip-build-tracker-egce28g2
2024-06-21T15:19:56,020 Initialized build tracking at /tmp/pip-build-tracker-egce28g2
2024-06-21T15:19:56,020 Created build tracker: /tmp/pip-build-tracker-egce28g2
2024-06-21T15:19:56,021 Entered build tracker: /tmp/pip-build-tracker-egce28g2
2024-06-21T15:19:56,021 Created temporary directory: /tmp/pip-wheel-9gg3sa5h
2024-06-21T15:19:56,025 Created temporary directory: /tmp/pip-ephem-wheel-cache-6u3etc9r
2024-06-21T15:19:56,049 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2024-06-21T15:19:56,053 2 location(s) to search for versions of kegg-pathways-completeness:
2024-06-21T15:19:56,053 * https://pypi.org/simple/kegg-pathways-completeness/
2024-06-21T15:19:56,053 * https://www.piwheels.org/simple/kegg-pathways-completeness/
2024-06-21T15:19:56,054 Fetching project page and analyzing links: https://pypi.org/simple/kegg-pathways-completeness/
2024-06-21T15:19:56,054 Getting page https://pypi.org/simple/kegg-pathways-completeness/
2024-06-21T15:19:56,056 Found index url https://pypi.org/simple/
2024-06-21T15:19:56,269 Fetched page https://pypi.org/simple/kegg-pathways-completeness/ as application/vnd.pypi.simple.v1+json
2024-06-21T15:19:56,271   Skipping link: No binaries permitted for kegg-pathways-completeness: https://files.pythonhosted.org/packages/dc/51/e6f9173867d01880a1e0f253fa087d9b278b6d306d428d3dc001cf040de2/kegg_pathways_completeness-1.0.1-py3-none-any.whl (from https://pypi.org/simple/kegg-pathways-completeness/) (requires-python:>=3.9)
2024-06-21T15:19:56,272   Found link https://files.pythonhosted.org/packages/0d/e3/4805c1c5a869edbf692bec1dacdda820f8499016be58c639fa170bf01be6/kegg_pathways_completeness-1.0.1.tar.gz (from https://pypi.org/simple/kegg-pathways-completeness/) (requires-python:>=3.9), version: 1.0.1
2024-06-21T15:19:56,273   Skipping link: No binaries permitted for kegg-pathways-completeness: https://files.pythonhosted.org/packages/e0/de/f4102b7d349e219b6c4710791e49a27adaa6e7a28e89f8cfc2108d85cf79/kegg_pathways_completeness-1.0.2-py3-none-any.whl (from https://pypi.org/simple/kegg-pathways-completeness/) (requires-python:>=3.10)
2024-06-21T15:19:56,274   Found link https://files.pythonhosted.org/packages/ce/79/13f369324a67756ebcf689401c0151360f7e322cb7e110739edfd80368bd/kegg_pathways_completeness-1.0.2.tar.gz (from https://pypi.org/simple/kegg-pathways-completeness/) (requires-python:>=3.10), version: 1.0.2
2024-06-21T15:19:56,274 Fetching project page and analyzing links: https://www.piwheels.org/simple/kegg-pathways-completeness/
2024-06-21T15:19:56,275 Getting page https://www.piwheels.org/simple/kegg-pathways-completeness/
2024-06-21T15:19:56,277 Found index url https://www.piwheels.org/simple/
2024-06-21T15:19:56,430 Fetched page https://www.piwheels.org/simple/kegg-pathways-completeness/ as text/html
2024-06-21T15:19:56,432   Skipping link: No binaries permitted for kegg-pathways-completeness: https://www.piwheels.org/simple/kegg-pathways-completeness/kegg_pathways_completeness-1.0.1-py3-none-any.whl#sha256=d16f05d5e20d3b472ead82f7b520e3a655c52d5fbbc7cd4a98be89e085c01577 (from https://www.piwheels.org/simple/kegg-pathways-completeness/) (requires-python:>=3.9)
2024-06-21T15:19:56,433 Skipping link: not a file: https://www.piwheels.org/simple/kegg-pathways-completeness/
2024-06-21T15:19:56,433 Skipping link: not a file: https://pypi.org/simple/kegg-pathways-completeness/
2024-06-21T15:19:56,453 Given no hashes to check 1 links for project 'kegg-pathways-completeness': discarding no candidates
2024-06-21T15:19:56,472 Collecting kegg-pathways-completeness==1.0.2
2024-06-21T15:19:56,475   Created temporary directory: /tmp/pip-unpack-rj6tr7vc
2024-06-21T15:19:56,701   Downloading kegg_pathways_completeness-1.0.2.tar.gz (20 kB)
2024-06-21T15:19:56,792   Added kegg-pathways-completeness==1.0.2 from https://files.pythonhosted.org/packages/ce/79/13f369324a67756ebcf689401c0151360f7e322cb7e110739edfd80368bd/kegg_pathways_completeness-1.0.2.tar.gz to build tracker '/tmp/pip-build-tracker-egce28g2'
2024-06-21T15:19:56,797   Created temporary directory: /tmp/pip-build-env-1sbil9mm
2024-06-21T15:19:56,801   Installing build dependencies: started
2024-06-21T15:19:56,803   Running command pip subprocess to install build dependencies
2024-06-21T15:19:57,933   Using pip 24.0 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11)
2024-06-21T15:19:58,436   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2024-06-21T15:19:59,879   Collecting setuptools>=61.0
2024-06-21T15:19:59,893     Using cached https://www.piwheels.org/simple/setuptools/setuptools-70.1.0-py3-none-any.whl (882 kB)
2024-06-21T15:20:02,545   Installing collected packages: setuptools
2024-06-21T15:20:05,020   Successfully installed setuptools-70.1.0
2024-06-21T15:20:05,611   Installing build dependencies: finished with status 'done'
2024-06-21T15:20:05,614   Getting requirements to build wheel: started
2024-06-21T15:20:05,616   Running command Getting requirements to build wheel
2024-06-21T15:20:06,386   running egg_info
2024-06-21T15:20:06,390   writing kegg_pathways_completeness.egg-info/PKG-INFO
2024-06-21T15:20:06,396   writing dependency_links to kegg_pathways_completeness.egg-info/dependency_links.txt
2024-06-21T15:20:06,398   writing entry points to kegg_pathways_completeness.egg-info/entry_points.txt
2024-06-21T15:20:06,401   writing requirements to kegg_pathways_completeness.egg-info/requires.txt
2024-06-21T15:20:06,403   writing top-level names to kegg_pathways_completeness.egg-info/top_level.txt
2024-06-21T15:20:06,425   reading manifest file 'kegg_pathways_completeness.egg-info/SOURCES.txt'
2024-06-21T15:20:06,427   adding license file 'LICENSE'
2024-06-21T15:20:06,430   writing manifest file 'kegg_pathways_completeness.egg-info/SOURCES.txt'
2024-06-21T15:20:06,547   Getting requirements to build wheel: finished with status 'done'
2024-06-21T15:20:06,550   Created temporary directory: /tmp/pip-modern-metadata-it7y_oln
2024-06-21T15:20:06,553   Preparing metadata (pyproject.toml): started
2024-06-21T15:20:06,554   Running command Preparing metadata (pyproject.toml)
2024-06-21T15:20:07,321   running dist_info
2024-06-21T15:20:07,325   creating /tmp/pip-modern-metadata-it7y_oln/kegg_pathways_completeness.egg-info
2024-06-21T15:20:07,329   writing /tmp/pip-modern-metadata-it7y_oln/kegg_pathways_completeness.egg-info/PKG-INFO
2024-06-21T15:20:07,335   writing dependency_links to /tmp/pip-modern-metadata-it7y_oln/kegg_pathways_completeness.egg-info/dependency_links.txt
2024-06-21T15:20:07,336   writing entry points to /tmp/pip-modern-metadata-it7y_oln/kegg_pathways_completeness.egg-info/entry_points.txt
2024-06-21T15:20:07,339   writing requirements to /tmp/pip-modern-metadata-it7y_oln/kegg_pathways_completeness.egg-info/requires.txt
2024-06-21T15:20:07,340   writing top-level names to /tmp/pip-modern-metadata-it7y_oln/kegg_pathways_completeness.egg-info/top_level.txt
2024-06-21T15:20:07,342   writing manifest file '/tmp/pip-modern-metadata-it7y_oln/kegg_pathways_completeness.egg-info/SOURCES.txt'
2024-06-21T15:20:07,358   reading manifest file '/tmp/pip-modern-metadata-it7y_oln/kegg_pathways_completeness.egg-info/SOURCES.txt'
2024-06-21T15:20:07,360   adding license file 'LICENSE'
2024-06-21T15:20:07,362   writing manifest file '/tmp/pip-modern-metadata-it7y_oln/kegg_pathways_completeness.egg-info/SOURCES.txt'
2024-06-21T15:20:07,363   creating '/tmp/pip-modern-metadata-it7y_oln/kegg_pathways_completeness-1.0.2.dist-info'
2024-06-21T15:20:07,510   Preparing metadata (pyproject.toml): finished with status 'done'
2024-06-21T15:20:07,515   Source in /tmp/pip-wheel-9gg3sa5h/kegg-pathways-completeness_08ef65d17e214d169134bd2833f8a8cd has version 1.0.2, which satisfies requirement kegg-pathways-completeness==1.0.2 from https://files.pythonhosted.org/packages/ce/79/13f369324a67756ebcf689401c0151360f7e322cb7e110739edfd80368bd/kegg_pathways_completeness-1.0.2.tar.gz
2024-06-21T15:20:07,516   Removed kegg-pathways-completeness==1.0.2 from https://files.pythonhosted.org/packages/ce/79/13f369324a67756ebcf689401c0151360f7e322cb7e110739edfd80368bd/kegg_pathways_completeness-1.0.2.tar.gz from build tracker '/tmp/pip-build-tracker-egce28g2'
2024-06-21T15:20:07,521 Created temporary directory: /tmp/pip-unpack-ztaxyjac
2024-06-21T15:20:07,523 Created temporary directory: /tmp/pip-unpack-b5nbgznc
2024-06-21T15:20:07,544 Building wheels for collected packages: kegg-pathways-completeness
2024-06-21T15:20:07,548   Created temporary directory: /tmp/pip-wheel-k5ni1enb
2024-06-21T15:20:07,549   Destination directory: /tmp/pip-wheel-k5ni1enb
2024-06-21T15:20:07,551   Building wheel for kegg-pathways-completeness (pyproject.toml): started
2024-06-21T15:20:07,552   Running command Building wheel for kegg-pathways-completeness (pyproject.toml)
2024-06-21T15:20:08,262   running bdist_wheel
2024-06-21T15:20:08,275   running build
2024-06-21T15:20:08,276   running build_py
2024-06-21T15:20:08,280   creating build
2024-06-21T15:20:08,281   creating build/lib
2024-06-21T15:20:08,281   creating build/lib/kegg_pathways_completeness
2024-06-21T15:20:08,282   copying kegg_pathways_completeness/__init__.py -> build/lib/kegg_pathways_completeness
2024-06-21T15:20:08,285   creating build/lib/kegg_pathways_completeness/bin
2024-06-21T15:20:08,286   copying kegg_pathways_completeness/bin/give_pathways.py -> build/lib/kegg_pathways_completeness/bin
2024-06-21T15:20:08,289   copying kegg_pathways_completeness/bin/__init__.py -> build/lib/kegg_pathways_completeness/bin
2024-06-21T15:20:08,290   copying kegg_pathways_completeness/bin/plot_completeness_graphs.py -> build/lib/kegg_pathways_completeness/bin
2024-06-21T15:20:08,292   creating build/lib/kegg_pathways_completeness/bin/generate_hmmtable
2024-06-21T15:20:08,293   copying kegg_pathways_completeness/bin/generate_hmmtable/parsing_hmmscan.py -> build/lib/kegg_pathways_completeness/bin/generate_hmmtable
2024-06-21T15:20:08,295   copying kegg_pathways_completeness/bin/generate_hmmtable/hmmscan_tab.py -> build/lib/kegg_pathways_completeness/bin/generate_hmmtable
2024-06-21T15:20:08,297   copying kegg_pathways_completeness/bin/generate_hmmtable/__init__.py -> build/lib/kegg_pathways_completeness/bin/generate_hmmtable
2024-06-21T15:20:08,299   creating build/lib/kegg_pathways_completeness/bin/make_graphs
2024-06-21T15:20:08,300   copying kegg_pathways_completeness/bin/make_graphs/make_graphs.py -> build/lib/kegg_pathways_completeness/bin/make_graphs
2024-06-21T15:20:08,302   copying kegg_pathways_completeness/bin/make_graphs/get_dot.py -> build/lib/kegg_pathways_completeness/bin/make_graphs
2024-06-21T15:20:08,304   copying kegg_pathways_completeness/bin/make_graphs/__init__.py -> build/lib/kegg_pathways_completeness/bin/make_graphs
2024-06-21T15:20:08,305   copying kegg_pathways_completeness/bin/make_graphs/plot.py -> build/lib/kegg_pathways_completeness/bin/make_graphs
2024-06-21T15:20:08,308   creating build/lib/kegg_pathways_completeness/bin/update_pathways_data
2024-06-21T15:20:08,309   copying kegg_pathways_completeness/bin/update_pathways_data/create.py -> build/lib/kegg_pathways_completeness/bin/update_pathways_data
2024-06-21T15:20:08,311   copying kegg_pathways_completeness/bin/update_pathways_data/__init__.py -> build/lib/kegg_pathways_completeness/bin/update_pathways_data
2024-06-21T15:20:08,312   copying kegg_pathways_completeness/bin/update_pathways_data/check_list_pathways.py -> build/lib/kegg_pathways_completeness/bin/update_pathways_data
2024-06-21T15:20:08,314   copying kegg_pathways_completeness/bin/update_pathways_data/get_modules_list.py -> build/lib/kegg_pathways_completeness/bin/update_pathways_data
2024-06-21T15:20:08,317   creating build/lib/kegg_pathways_completeness/graphs
2024-06-21T15:20:08,318   copying kegg_pathways_completeness/graphs/__init__.py -> build/lib/kegg_pathways_completeness/graphs
2024-06-21T15:20:08,320   creating build/lib/kegg_pathways_completeness/pathways_data
2024-06-21T15:20:08,321   copying kegg_pathways_completeness/pathways_data/__init__.py -> build/lib/kegg_pathways_completeness/pathways_data
2024-06-21T15:20:08,322   running egg_info
2024-06-21T15:20:08,325   writing kegg_pathways_completeness.egg-info/PKG-INFO
2024-06-21T15:20:08,331   writing dependency_links to kegg_pathways_completeness.egg-info/dependency_links.txt
2024-06-21T15:20:08,333   writing entry points to kegg_pathways_completeness.egg-info/entry_points.txt
2024-06-21T15:20:08,336   writing requirements to kegg_pathways_completeness.egg-info/requires.txt
2024-06-21T15:20:08,337   writing top-level names to kegg_pathways_completeness.egg-info/top_level.txt
2024-06-21T15:20:08,348   reading manifest file 'kegg_pathways_completeness.egg-info/SOURCES.txt'
2024-06-21T15:20:08,350   adding license file 'LICENSE'
2024-06-21T15:20:08,353   writing manifest file 'kegg_pathways_completeness.egg-info/SOURCES.txt'
2024-06-21T15:20:08,365   installing to build/bdist.linux-armv7l/wheel
2024-06-21T15:20:08,366   running install
2024-06-21T15:20:08,389   running install_lib
2024-06-21T15:20:08,393   creating build/bdist.linux-armv7l
2024-06-21T15:20:08,394   creating build/bdist.linux-armv7l/wheel
2024-06-21T15:20:08,395   creating build/bdist.linux-armv7l/wheel/kegg_pathways_completeness
2024-06-21T15:20:08,396   creating build/bdist.linux-armv7l/wheel/kegg_pathways_completeness/graphs
2024-06-21T15:20:08,397   copying build/lib/kegg_pathways_completeness/graphs/__init__.py -> build/bdist.linux-armv7l/wheel/kegg_pathways_completeness/graphs
2024-06-21T15:20:08,399   copying build/lib/kegg_pathways_completeness/__init__.py -> build/bdist.linux-armv7l/wheel/kegg_pathways_completeness
2024-06-21T15:20:08,401   creating build/bdist.linux-armv7l/wheel/kegg_pathways_completeness/bin
2024-06-21T15:20:08,402   creating build/bdist.linux-armv7l/wheel/kegg_pathways_completeness/bin/generate_hmmtable
2024-06-21T15:20:08,403   copying build/lib/kegg_pathways_completeness/bin/generate_hmmtable/parsing_hmmscan.py -> build/bdist.linux-armv7l/wheel/kegg_pathways_completeness/bin/generate_hmmtable
2024-06-21T15:20:08,405   copying build/lib/kegg_pathways_completeness/bin/generate_hmmtable/hmmscan_tab.py -> build/bdist.linux-armv7l/wheel/kegg_pathways_completeness/bin/generate_hmmtable
2024-06-21T15:20:08,407   copying build/lib/kegg_pathways_completeness/bin/generate_hmmtable/__init__.py -> build/bdist.linux-armv7l/wheel/kegg_pathways_completeness/bin/generate_hmmtable
2024-06-21T15:20:08,409   creating build/bdist.linux-armv7l/wheel/kegg_pathways_completeness/bin/update_pathways_data
2024-06-21T15:20:08,410   copying build/lib/kegg_pathways_completeness/bin/update_pathways_data/create.py -> build/bdist.linux-armv7l/wheel/kegg_pathways_completeness/bin/update_pathways_data
2024-06-21T15:20:08,412   copying build/lib/kegg_pathways_completeness/bin/update_pathways_data/__init__.py -> build/bdist.linux-armv7l/wheel/kegg_pathways_completeness/bin/update_pathways_data
2024-06-21T15:20:08,414   copying build/lib/kegg_pathways_completeness/bin/update_pathways_data/check_list_pathways.py -> build/bdist.linux-armv7l/wheel/kegg_pathways_completeness/bin/update_pathways_data
2024-06-21T15:20:08,416   copying build/lib/kegg_pathways_completeness/bin/update_pathways_data/get_modules_list.py -> build/bdist.linux-armv7l/wheel/kegg_pathways_completeness/bin/update_pathways_data
2024-06-21T15:20:08,418   copying build/lib/kegg_pathways_completeness/bin/give_pathways.py -> build/bdist.linux-armv7l/wheel/kegg_pathways_completeness/bin
2024-06-21T15:20:08,421   creating build/bdist.linux-armv7l/wheel/kegg_pathways_completeness/bin/make_graphs
2024-06-21T15:20:08,422   copying build/lib/kegg_pathways_completeness/bin/make_graphs/make_graphs.py -> build/bdist.linux-armv7l/wheel/kegg_pathways_completeness/bin/make_graphs
2024-06-21T15:20:08,424   copying build/lib/kegg_pathways_completeness/bin/make_graphs/get_dot.py -> build/bdist.linux-armv7l/wheel/kegg_pathways_completeness/bin/make_graphs
2024-06-21T15:20:08,426   copying build/lib/kegg_pathways_completeness/bin/make_graphs/__init__.py -> build/bdist.linux-armv7l/wheel/kegg_pathways_completeness/bin/make_graphs
2024-06-21T15:20:08,428   copying build/lib/kegg_pathways_completeness/bin/make_graphs/plot.py -> build/bdist.linux-armv7l/wheel/kegg_pathways_completeness/bin/make_graphs
2024-06-21T15:20:08,430   copying build/lib/kegg_pathways_completeness/bin/__init__.py -> build/bdist.linux-armv7l/wheel/kegg_pathways_completeness/bin
2024-06-21T15:20:08,431   copying build/lib/kegg_pathways_completeness/bin/plot_completeness_graphs.py -> build/bdist.linux-armv7l/wheel/kegg_pathways_completeness/bin
2024-06-21T15:20:08,433   creating build/bdist.linux-armv7l/wheel/kegg_pathways_completeness/pathways_data
2024-06-21T15:20:08,434   copying build/lib/kegg_pathways_completeness/pathways_data/__init__.py -> build/bdist.linux-armv7l/wheel/kegg_pathways_completeness/pathways_data
2024-06-21T15:20:08,435   running install_egg_info
2024-06-21T15:20:08,439   Copying kegg_pathways_completeness.egg-info to build/bdist.linux-armv7l/wheel/kegg_pathways_completeness-1.0.2-py3.11.egg-info
2024-06-21T15:20:08,450   running install_scripts
2024-06-21T15:20:08,466   creating build/bdist.linux-armv7l/wheel/kegg_pathways_completeness-1.0.2.dist-info/WHEEL
2024-06-21T15:20:08,469   creating '/tmp/pip-wheel-k5ni1enb/.tmp-fvq14b0g/kegg_pathways_completeness-1.0.2-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2024-06-21T15:20:08,471   adding 'kegg_pathways_completeness/__init__.py'
2024-06-21T15:20:08,472   adding 'kegg_pathways_completeness/bin/__init__.py'
2024-06-21T15:20:08,475   adding 'kegg_pathways_completeness/bin/give_pathways.py'
2024-06-21T15:20:08,477   adding 'kegg_pathways_completeness/bin/plot_completeness_graphs.py'
2024-06-21T15:20:08,478   adding 'kegg_pathways_completeness/bin/generate_hmmtable/__init__.py'
2024-06-21T15:20:08,480   adding 'kegg_pathways_completeness/bin/generate_hmmtable/hmmscan_tab.py'
2024-06-21T15:20:08,481   adding 'kegg_pathways_completeness/bin/generate_hmmtable/parsing_hmmscan.py'
2024-06-21T15:20:08,482   adding 'kegg_pathways_completeness/bin/make_graphs/__init__.py'
2024-06-21T15:20:08,484   adding 'kegg_pathways_completeness/bin/make_graphs/get_dot.py'
2024-06-21T15:20:08,486   adding 'kegg_pathways_completeness/bin/make_graphs/make_graphs.py'
2024-06-21T15:20:08,487   adding 'kegg_pathways_completeness/bin/make_graphs/plot.py'
2024-06-21T15:20:08,488   adding 'kegg_pathways_completeness/bin/update_pathways_data/__init__.py'
2024-06-21T15:20:08,490   adding 'kegg_pathways_completeness/bin/update_pathways_data/check_list_pathways.py'
2024-06-21T15:20:08,491   adding 'kegg_pathways_completeness/bin/update_pathways_data/create.py'
2024-06-21T15:20:08,492   adding 'kegg_pathways_completeness/bin/update_pathways_data/get_modules_list.py'
2024-06-21T15:20:08,494   adding 'kegg_pathways_completeness/graphs/__init__.py'
2024-06-21T15:20:08,495   adding 'kegg_pathways_completeness/pathways_data/__init__.py'
2024-06-21T15:20:08,498   adding 'kegg_pathways_completeness-1.0.2.dist-info/LICENSE'
2024-06-21T15:20:08,500   adding 'kegg_pathways_completeness-1.0.2.dist-info/METADATA'
2024-06-21T15:20:08,501   adding 'kegg_pathways_completeness-1.0.2.dist-info/WHEEL'
2024-06-21T15:20:08,502   adding 'kegg_pathways_completeness-1.0.2.dist-info/entry_points.txt'
2024-06-21T15:20:08,503   adding 'kegg_pathways_completeness-1.0.2.dist-info/top_level.txt'
2024-06-21T15:20:08,504   adding 'kegg_pathways_completeness-1.0.2.dist-info/RECORD'
2024-06-21T15:20:08,506   removing build/bdist.linux-armv7l/wheel
2024-06-21T15:20:08,630   Building wheel for kegg-pathways-completeness (pyproject.toml): finished with status 'done'
2024-06-21T15:20:08,635   Created wheel for kegg-pathways-completeness: filename=kegg_pathways_completeness-1.0.2-py3-none-any.whl size=24938 sha256=a7266314f04fbe532f08f0bcbf985df8f0dbcfb80ed1fff98c43d1bfceaa014d
2024-06-21T15:20:08,636   Stored in directory: /tmp/pip-ephem-wheel-cache-6u3etc9r/wheels/a6/88/87/2a048b2b4758c811c4693f3ecb2ac942185497ebc99fa33787
2024-06-21T15:20:08,647 Successfully built kegg-pathways-completeness
2024-06-21T15:20:08,651 Removed build tracker: '/tmp/pip-build-tracker-egce28g2'