2024-07-01T11:42:46,575 Created temporary directory: /tmp/pip-build-tracker-3l6jk1hz 2024-07-01T11:42:46,576 Initialized build tracking at /tmp/pip-build-tracker-3l6jk1hz 2024-07-01T11:42:46,577 Created build tracker: /tmp/pip-build-tracker-3l6jk1hz 2024-07-01T11:42:46,577 Entered build tracker: /tmp/pip-build-tracker-3l6jk1hz 2024-07-01T11:42:46,578 Created temporary directory: /tmp/pip-wheel-xnr1a2mc 2024-07-01T11:42:46,581 Created temporary directory: /tmp/pip-ephem-wheel-cache-e2pe4ddh 2024-07-01T11:42:46,603 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-07-01T11:42:46,606 2 location(s) to search for versions of perpl: 2024-07-01T11:42:46,606 * https://pypi.org/simple/perpl/ 2024-07-01T11:42:46,606 * https://www.piwheels.org/simple/perpl/ 2024-07-01T11:42:46,607 Fetching project page and analyzing links: https://pypi.org/simple/perpl/ 2024-07-01T11:42:46,608 Getting page https://pypi.org/simple/perpl/ 2024-07-01T11:42:46,609 Found index url https://pypi.org/simple/ 2024-07-01T11:42:46,820 Fetched page https://pypi.org/simple/perpl/ as application/vnd.pypi.simple.v1+json 2024-07-01T11:42:46,822 Skipping link: No binaries permitted for perpl: https://files.pythonhosted.org/packages/cd/0c/5adcd2989d1289765fa444ab8a14d7588e45f0bdb11a26af8b5914e5343a/perpl-0.3.0-py3-none-any.whl (from https://pypi.org/simple/perpl/) (requires-python:>=3.11) 2024-07-01T11:42:46,823 Found link https://files.pythonhosted.org/packages/33/5c/6980a1529a5801afc3324fe8cba0d6155c45d43d7ac45f6893e6bf88cf6a/perpl-0.3.0.tar.gz (from https://pypi.org/simple/perpl/) (requires-python:>=3.11), version: 0.3.0 2024-07-01T11:42:46,824 Skipping link: No binaries permitted for perpl: https://files.pythonhosted.org/packages/94/75/d114a11124d1243c286596e15049f0ae299203f71fcc657760d0664328ef/perpl-0.3.1-py3-none-any.whl (from https://pypi.org/simple/perpl/) (requires-python:>=3.11) 2024-07-01T11:42:46,825 Found link https://files.pythonhosted.org/packages/dd/fb/75164cdea1c27fef9e265567e9afa9b6a6c7b5223a3058b2cbb93574bc07/perpl-0.3.1.tar.gz (from https://pypi.org/simple/perpl/) (requires-python:>=3.11), version: 0.3.1 2024-07-01T11:42:46,825 Skipping link: No binaries permitted for perpl: https://files.pythonhosted.org/packages/58/c7/ea083a91d702721c307d7b8b24e73298598fddb0a72123f815fc3a50111e/perpl-0.3.2-py3-none-any.whl (from https://pypi.org/simple/perpl/) (requires-python:>=3.11) 2024-07-01T11:42:46,826 Found link https://files.pythonhosted.org/packages/ff/8e/61869e171b51a4c79a43e5f70040aa474a7396e94411fee722df0e07fac4/perpl-0.3.2.tar.gz (from https://pypi.org/simple/perpl/) (requires-python:>=3.11), version: 0.3.2 2024-07-01T11:42:46,827 Fetching project page and analyzing links: https://www.piwheels.org/simple/perpl/ 2024-07-01T11:42:46,828 Getting page https://www.piwheels.org/simple/perpl/ 2024-07-01T11:42:46,829 Found index url https://www.piwheels.org/simple/ 2024-07-01T11:42:47,001 Fetched page https://www.piwheels.org/simple/perpl/ as text/html 2024-07-01T11:42:47,003 Skipping link: No binaries permitted for perpl: https://www.piwheels.org/simple/perpl/perpl-0.3.1-py3-none-any.whl#sha256=429e2b0f591e6be0f5f3421ed7922a3d28ace437182c1563302d24d0bf7a5454 (from https://www.piwheels.org/simple/perpl/) (requires-python:>=3.11) 2024-07-01T11:42:47,004 Skipping link: No binaries permitted for perpl: https://www.piwheels.org/simple/perpl/perpl-0.3.0-py3-none-any.whl#sha256=d35437be4d2bacd588ae5db43d54925d305c66568a4d6ab48aacf11d30a4a2e8 (from https://www.piwheels.org/simple/perpl/) (requires-python:>=3.11) 2024-07-01T11:42:47,004 Skipping link: not a file: https://www.piwheels.org/simple/perpl/ 2024-07-01T11:42:47,005 Skipping link: not a file: https://pypi.org/simple/perpl/ 2024-07-01T11:42:47,025 Given no hashes to check 1 links for project 'perpl': discarding no candidates 2024-07-01T11:42:47,044 Collecting perpl==0.3.2 2024-07-01T11:42:47,046 Created temporary directory: /tmp/pip-unpack-_u0niqjg 2024-07-01T11:42:47,256 Downloading perpl-0.3.2.tar.gz (739 kB) 2024-07-01T11:42:47,517 Added perpl==0.3.2 from https://files.pythonhosted.org/packages/ff/8e/61869e171b51a4c79a43e5f70040aa474a7396e94411fee722df0e07fac4/perpl-0.3.2.tar.gz to build tracker '/tmp/pip-build-tracker-3l6jk1hz' 2024-07-01T11:42:47,522 Created temporary directory: /tmp/pip-build-env-958p7gbg 2024-07-01T11:42:47,527 Installing build dependencies: started 2024-07-01T11:42:47,528 Running command pip subprocess to install build dependencies 2024-07-01T11:42:48,662 Using pip 24.0 from /home/piwheels/.local/lib/python3.11/site-packages/pip (python 3.11) 2024-07-01T11:42:49,213 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-07-01T11:42:50,647 Collecting setuptools>=64.0 2024-07-01T11:42:50,661 Using cached https://www.piwheels.org/simple/setuptools/setuptools-70.1.1-py3-none-any.whl (883 kB) 2024-07-01T11:42:50,962 Collecting setuptools-scm>=8.0 2024-07-01T11:42:50,976 Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-8.1.0-py3-none-any.whl (43 kB) 2024-07-01T11:42:51,305 Collecting packaging>=20 (from setuptools-scm>=8.0) 2024-07-01T11:42:51,319 Using cached https://www.piwheels.org/simple/packaging/packaging-24.1-py3-none-any.whl (53 kB) 2024-07-01T11:42:54,024 Installing collected packages: setuptools, packaging, setuptools-scm 2024-07-01T11:42:57,053 Successfully installed packaging-24.1 setuptools-70.1.1 setuptools-scm-8.1.0 2024-07-01T11:42:57,303 [notice] A new release of pip is available: 24.0 -> 24.1 2024-07-01T11:42:57,304 [notice] To update, run: python3 -m pip install --upgrade pip 2024-07-01T11:42:57,585 Installing build dependencies: finished with status 'done' 2024-07-01T11:42:57,588 Getting requirements to build wheel: started 2024-07-01T11:42:57,589 Running command Getting requirements to build wheel 2024-07-01T11:42:58,476 running egg_info 2024-07-01T11:42:58,481 writing src/perpl.egg-info/PKG-INFO 2024-07-01T11:42:58,484 writing dependency_links to src/perpl.egg-info/dependency_links.txt 2024-07-01T11:42:58,486 writing entry points to src/perpl.egg-info/entry_points.txt 2024-07-01T11:42:58,488 writing requirements to src/perpl.egg-info/requires.txt 2024-07-01T11:42:58,489 writing top-level names to src/perpl.egg-info/top_level.txt 2024-07-01T11:42:58,529 ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any 2024-07-01T11:42:58,533 reading manifest file 'src/perpl.egg-info/SOURCES.txt' 2024-07-01T11:42:58,539 writing manifest file 'src/perpl.egg-info/SOURCES.txt' 2024-07-01T11:42:58,660 Getting requirements to build wheel: finished with status 'done' 2024-07-01T11:42:58,663 Created temporary directory: /tmp/pip-modern-metadata-8953csle 2024-07-01T11:42:58,666 Preparing metadata (pyproject.toml): started 2024-07-01T11:42:58,667 Running command Preparing metadata (pyproject.toml) 2024-07-01T11:42:59,510 running dist_info 2024-07-01T11:42:59,515 creating /tmp/pip-modern-metadata-8953csle/perpl.egg-info 2024-07-01T11:42:59,520 writing /tmp/pip-modern-metadata-8953csle/perpl.egg-info/PKG-INFO 2024-07-01T11:42:59,524 writing dependency_links to /tmp/pip-modern-metadata-8953csle/perpl.egg-info/dependency_links.txt 2024-07-01T11:42:59,526 writing entry points to /tmp/pip-modern-metadata-8953csle/perpl.egg-info/entry_points.txt 2024-07-01T11:42:59,527 writing requirements to /tmp/pip-modern-metadata-8953csle/perpl.egg-info/requires.txt 2024-07-01T11:42:59,529 writing top-level names to /tmp/pip-modern-metadata-8953csle/perpl.egg-info/top_level.txt 2024-07-01T11:42:59,530 writing manifest file '/tmp/pip-modern-metadata-8953csle/perpl.egg-info/SOURCES.txt' 2024-07-01T11:42:59,565 ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any 2024-07-01T11:42:59,568 reading manifest file '/tmp/pip-modern-metadata-8953csle/perpl.egg-info/SOURCES.txt' 2024-07-01T11:42:59,572 writing manifest file '/tmp/pip-modern-metadata-8953csle/perpl.egg-info/SOURCES.txt' 2024-07-01T11:42:59,573 creating '/tmp/pip-modern-metadata-8953csle/perpl-0.3.2.dist-info' 2024-07-01T11:42:59,726 Preparing metadata (pyproject.toml): finished with status 'done' 2024-07-01T11:42:59,731 Source in /tmp/pip-wheel-xnr1a2mc/perpl_d1735221b8c044ffa4f0e76dc5cffe6b has version 0.3.2, which satisfies requirement perpl==0.3.2 from https://files.pythonhosted.org/packages/ff/8e/61869e171b51a4c79a43e5f70040aa474a7396e94411fee722df0e07fac4/perpl-0.3.2.tar.gz 2024-07-01T11:42:59,732 Removed perpl==0.3.2 from https://files.pythonhosted.org/packages/ff/8e/61869e171b51a4c79a43e5f70040aa474a7396e94411fee722df0e07fac4/perpl-0.3.2.tar.gz from build tracker '/tmp/pip-build-tracker-3l6jk1hz' 2024-07-01T11:42:59,737 WARNING: The candidate selected for download or install is a yanked version: 'perpl' candidate (version 0.3.2 at https://files.pythonhosted.org/packages/ff/8e/61869e171b51a4c79a43e5f70040aa474a7396e94411fee722df0e07fac4/perpl-0.3.2.tar.gz (from https://pypi.org/simple/perpl/) (requires-python:>=3.11)) 2024-07-01T11:42:59,737 Reason for being yanked: Submodule references are not working 2024-07-01T11:42:59,740 Created temporary directory: /tmp/pip-unpack-1zoolc_8 2024-07-01T11:42:59,740 Created temporary directory: /tmp/pip-unpack-0yh588tg 2024-07-01T11:42:59,753 Building wheels for collected packages: perpl 2024-07-01T11:42:59,757 Created temporary directory: /tmp/pip-wheel-uh15ivs2 2024-07-01T11:42:59,757 Destination directory: /tmp/pip-wheel-uh15ivs2 2024-07-01T11:42:59,759 Building wheel for perpl (pyproject.toml): started 2024-07-01T11:42:59,760 Running command Building wheel for perpl (pyproject.toml) 2024-07-01T11:43:00,760 running bdist_wheel 2024-07-01T11:43:00,780 running build 2024-07-01T11:43:00,781 running build_py 2024-07-01T11:43:00,786 creating build 2024-07-01T11:43:00,786 creating build/lib 2024-07-01T11:43:00,787 creating build/lib/perpl 2024-07-01T11:43:00,788 copying src/perpl/relative_positions.py -> build/lib/perpl 2024-07-01T11:43:00,791 copying src/perpl/__init__.py -> build/lib/perpl 2024-07-01T11:43:00,793 copying src/perpl/rot_2d_symm_fit.py -> build/lib/perpl 2024-07-01T11:43:00,801 creating build/lib/perpl/modelling 2024-07-01T11:43:00,801 copying src/perpl/modelling/zdisk_plots.py -> build/lib/perpl/modelling 2024-07-01T11:43:00,804 copying src/perpl/modelling/two_layer_fitting.py -> build/lib/perpl/modelling 2024-07-01T11:43:00,807 copying src/perpl/modelling/__init__.py -> build/lib/perpl/modelling 2024-07-01T11:43:00,808 copying src/perpl/modelling/centriole_analysis.py -> build/lib/perpl/modelling 2024-07-01T11:43:00,811 copying src/perpl/modelling/linearrepeatmodels.py -> build/lib/perpl/modelling 2024-07-01T11:43:00,814 copying src/perpl/modelling/dna_paint_data_fitting.py -> build/lib/perpl/modelling 2024-07-01T11:43:00,818 copying src/perpl/modelling/models_2d_distances_normalised.py -> build/lib/perpl/modelling 2024-07-01T11:43:00,820 copying src/perpl/modelling/zdisk_modelling.py -> build/lib/perpl/modelling 2024-07-01T11:43:00,824 copying src/perpl/modelling/background_models.py -> build/lib/perpl/modelling 2024-07-01T11:43:00,826 copying src/perpl/modelling/modelling_general.py -> build/lib/perpl/modelling 2024-07-01T11:43:00,828 copying src/perpl/modelling/polyhedramodelling.py -> build/lib/perpl/modelling 2024-07-01T11:43:00,832 creating build/lib/perpl/statistics 2024-07-01T11:43:00,833 copying src/perpl/statistics/modelstats.py -> build/lib/perpl/statistics 2024-07-01T11:43:00,835 creating build/lib/perpl/io 2024-07-01T11:43:00,836 copying src/perpl/io/reports.py -> build/lib/perpl/io 2024-07-01T11:43:00,839 copying src/perpl/io/plotting.py -> build/lib/perpl/io 2024-07-01T11:43:00,842 copying src/perpl/io/__init__.py -> build/lib/perpl/io 2024-07-01T11:43:00,843 copying src/perpl/io/utils.py -> build/lib/perpl/io 2024-07-01T11:43:00,845 running egg_info 2024-07-01T11:43:00,849 writing src/perpl.egg-info/PKG-INFO 2024-07-01T11:43:00,853 writing dependency_links to src/perpl.egg-info/dependency_links.txt 2024-07-01T11:43:00,854 writing entry points to src/perpl.egg-info/entry_points.txt 2024-07-01T11:43:00,856 writing requirements to src/perpl.egg-info/requires.txt 2024-07-01T11:43:00,857 writing top-level names to src/perpl.egg-info/top_level.txt 2024-07-01T11:43:00,884 ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any 2024-07-01T11:43:00,887 reading manifest file 'src/perpl.egg-info/SOURCES.txt' 2024-07-01T11:43:00,892 writing manifest file 'src/perpl.egg-info/SOURCES.txt' 2024-07-01T11:43:00,896 copying src/perpl/statistics/__init.py__ -> build/lib/perpl/statistics 2024-07-01T11:43:00,907 installing to build/bdist.linux-armv7l/wheel 2024-07-01T11:43:00,908 running install 2024-07-01T11:43:00,932 running install_lib 2024-07-01T11:43:00,937 creating build/bdist.linux-armv7l 2024-07-01T11:43:00,937 creating build/bdist.linux-armv7l/wheel 2024-07-01T11:43:00,939 creating build/bdist.linux-armv7l/wheel/perpl 2024-07-01T11:43:00,940 creating build/bdist.linux-armv7l/wheel/perpl/modelling 2024-07-01T11:43:00,941 copying build/lib/perpl/modelling/zdisk_plots.py -> build/bdist.linux-armv7l/wheel/perpl/modelling 2024-07-01T11:43:00,944 copying build/lib/perpl/modelling/two_layer_fitting.py -> build/bdist.linux-armv7l/wheel/perpl/modelling 2024-07-01T11:43:00,947 copying build/lib/perpl/modelling/__init__.py -> build/bdist.linux-armv7l/wheel/perpl/modelling 2024-07-01T11:43:00,948 copying build/lib/perpl/modelling/centriole_analysis.py -> build/bdist.linux-armv7l/wheel/perpl/modelling 2024-07-01T11:43:00,951 copying build/lib/perpl/modelling/linearrepeatmodels.py -> build/bdist.linux-armv7l/wheel/perpl/modelling 2024-07-01T11:43:00,954 copying build/lib/perpl/modelling/dna_paint_data_fitting.py -> build/bdist.linux-armv7l/wheel/perpl/modelling 2024-07-01T11:43:00,957 copying build/lib/perpl/modelling/models_2d_distances_normalised.py -> build/bdist.linux-armv7l/wheel/perpl/modelling 2024-07-01T11:43:00,959 copying build/lib/perpl/modelling/zdisk_modelling.py -> build/bdist.linux-armv7l/wheel/perpl/modelling 2024-07-01T11:43:00,963 copying build/lib/perpl/modelling/background_models.py -> build/bdist.linux-armv7l/wheel/perpl/modelling 2024-07-01T11:43:00,965 copying build/lib/perpl/modelling/modelling_general.py -> build/bdist.linux-armv7l/wheel/perpl/modelling 2024-07-01T11:43:00,967 copying build/lib/perpl/modelling/polyhedramodelling.py -> build/bdist.linux-armv7l/wheel/perpl/modelling 2024-07-01T11:43:00,970 creating build/bdist.linux-armv7l/wheel/perpl/statistics 2024-07-01T11:43:00,971 copying build/lib/perpl/statistics/__init.py__ -> build/bdist.linux-armv7l/wheel/perpl/statistics 2024-07-01T11:43:00,973 copying build/lib/perpl/statistics/modelstats.py -> build/bdist.linux-armv7l/wheel/perpl/statistics 2024-07-01T11:43:00,975 creating build/bdist.linux-armv7l/wheel/perpl/io 2024-07-01T11:43:00,976 copying build/lib/perpl/io/reports.py -> build/bdist.linux-armv7l/wheel/perpl/io 2024-07-01T11:43:00,979 copying build/lib/perpl/io/plotting.py -> build/bdist.linux-armv7l/wheel/perpl/io 2024-07-01T11:43:00,981 copying build/lib/perpl/io/__init__.py -> build/bdist.linux-armv7l/wheel/perpl/io 2024-07-01T11:43:00,983 copying build/lib/perpl/io/utils.py -> build/bdist.linux-armv7l/wheel/perpl/io 2024-07-01T11:43:00,985 copying build/lib/perpl/relative_positions.py -> build/bdist.linux-armv7l/wheel/perpl 2024-07-01T11:43:00,988 copying build/lib/perpl/__init__.py -> build/bdist.linux-armv7l/wheel/perpl 2024-07-01T11:43:00,990 copying build/lib/perpl/rot_2d_symm_fit.py -> build/bdist.linux-armv7l/wheel/perpl 2024-07-01T11:43:00,993 running install_egg_info 2024-07-01T11:43:00,997 Copying src/perpl.egg-info to build/bdist.linux-armv7l/wheel/perpl-0.3.2-py3.11.egg-info 2024-07-01T11:43:01,009 running install_scripts 2024-07-01T11:43:01,025 creating build/bdist.linux-armv7l/wheel/perpl-0.3.2.dist-info/WHEEL 2024-07-01T11:43:01,028 creating '/tmp/pip-wheel-uh15ivs2/.tmp-h_fl8y3d/perpl-0.3.2-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-07-01T11:43:01,030 adding 'perpl/__init__.py' 2024-07-01T11:43:01,035 adding 'perpl/relative_positions.py' 2024-07-01T11:43:01,040 adding 'perpl/rot_2d_symm_fit.py' 2024-07-01T11:43:01,042 adding 'perpl/io/__init__.py' 2024-07-01T11:43:01,046 adding 'perpl/io/plotting.py' 2024-07-01T11:43:01,048 adding 'perpl/io/reports.py' 2024-07-01T11:43:01,050 adding 'perpl/io/utils.py' 2024-07-01T11:43:01,052 adding 'perpl/modelling/__init__.py' 2024-07-01T11:43:01,053 adding 'perpl/modelling/background_models.py' 2024-07-01T11:43:01,058 adding 'perpl/modelling/centriole_analysis.py' 2024-07-01T11:43:01,062 adding 'perpl/modelling/dna_paint_data_fitting.py' 2024-07-01T11:43:01,065 adding 'perpl/modelling/linearrepeatmodels.py' 2024-07-01T11:43:01,068 adding 'perpl/modelling/modelling_general.py' 2024-07-01T11:43:01,069 adding 'perpl/modelling/models_2d_distances_normalised.py' 2024-07-01T11:43:01,072 adding 'perpl/modelling/polyhedramodelling.py' 2024-07-01T11:43:01,074 adding 'perpl/modelling/two_layer_fitting.py' 2024-07-01T11:43:01,078 adding 'perpl/modelling/zdisk_modelling.py' 2024-07-01T11:43:01,081 adding 'perpl/modelling/zdisk_plots.py' 2024-07-01T11:43:01,083 adding 'perpl/statistics/__init.py__' 2024-07-01T11:43:01,084 adding 'perpl/statistics/modelstats.py' 2024-07-01T11:43:01,087 adding 'perpl-0.3.2.dist-info/METADATA' 2024-07-01T11:43:01,088 adding 'perpl-0.3.2.dist-info/WHEEL' 2024-07-01T11:43:01,089 adding 'perpl-0.3.2.dist-info/entry_points.txt' 2024-07-01T11:43:01,090 adding 'perpl-0.3.2.dist-info/top_level.txt' 2024-07-01T11:43:01,091 adding 'perpl-0.3.2.dist-info/RECORD' 2024-07-01T11:43:01,094 removing build/bdist.linux-armv7l/wheel 2024-07-01T11:43:01,223 Building wheel for perpl (pyproject.toml): finished with status 'done' 2024-07-01T11:43:01,229 Created wheel for perpl: filename=perpl-0.3.2-py3-none-any.whl size=89531 sha256=d000d326064b7cf9bb78bac3ad1b19b9e107b2a2c90ce63e43f68fb647b2d550 2024-07-01T11:43:01,231 Stored in directory: /tmp/pip-ephem-wheel-cache-e2pe4ddh/wheels/5e/2c/4d/7a99d9ae283d4701530f5cac46225e770d5e3dfff77fe6bc36 2024-07-01T11:43:01,243 Successfully built perpl 2024-07-01T11:43:01,250 Removed build tracker: '/tmp/pip-build-tracker-3l6jk1hz'