2024-07-01T13:43:54,117 Created temporary directory: /tmp/pip-build-tracker-gci7qbj3 2024-07-01T13:43:54,118 Initialized build tracking at /tmp/pip-build-tracker-gci7qbj3 2024-07-01T13:43:54,118 Created build tracker: /tmp/pip-build-tracker-gci7qbj3 2024-07-01T13:43:54,119 Entered build tracker: /tmp/pip-build-tracker-gci7qbj3 2024-07-01T13:43:54,119 Created temporary directory: /tmp/pip-wheel-0ssvs3pr 2024-07-01T13:43:54,122 Created temporary directory: /tmp/pip-ephem-wheel-cache-0_odc6p3 2024-07-01T13:43:54,146 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-07-01T13:43:54,150 2 location(s) to search for versions of perpl: 2024-07-01T13:43:54,150 * https://pypi.org/simple/perpl/ 2024-07-01T13:43:54,150 * https://www.piwheels.org/simple/perpl/ 2024-07-01T13:43:54,150 Fetching project page and analyzing links: https://pypi.org/simple/perpl/ 2024-07-01T13:43:54,151 Getting page https://pypi.org/simple/perpl/ 2024-07-01T13:43:54,153 Found index url https://pypi.org/simple/ 2024-07-01T13:43:54,368 Fetched page https://pypi.org/simple/perpl/ as application/vnd.pypi.simple.v1+json 2024-07-01T13:43:54,371 Skipping link: No binaries permitted for perpl: https://files.pythonhosted.org/packages/cd/0c/5adcd2989d1289765fa444ab8a14d7588e45f0bdb11a26af8b5914e5343a/perpl-0.3.0-py3-none-any.whl (from https://pypi.org/simple/perpl/) (requires-python:>=3.11) 2024-07-01T13:43:54,372 Found link https://files.pythonhosted.org/packages/33/5c/6980a1529a5801afc3324fe8cba0d6155c45d43d7ac45f6893e6bf88cf6a/perpl-0.3.0.tar.gz (from https://pypi.org/simple/perpl/) (requires-python:>=3.11), version: 0.3.0 2024-07-01T13:43:54,372 Skipping link: No binaries permitted for perpl: https://files.pythonhosted.org/packages/94/75/d114a11124d1243c286596e15049f0ae299203f71fcc657760d0664328ef/perpl-0.3.1-py3-none-any.whl (from https://pypi.org/simple/perpl/) (requires-python:>=3.11) 2024-07-01T13:43:54,373 Found link https://files.pythonhosted.org/packages/dd/fb/75164cdea1c27fef9e265567e9afa9b6a6c7b5223a3058b2cbb93574bc07/perpl-0.3.1.tar.gz (from https://pypi.org/simple/perpl/) (requires-python:>=3.11), version: 0.3.1 2024-07-01T13:43:54,374 Skipping link: No binaries permitted for perpl: https://files.pythonhosted.org/packages/58/c7/ea083a91d702721c307d7b8b24e73298598fddb0a72123f815fc3a50111e/perpl-0.3.2-py3-none-any.whl (from https://pypi.org/simple/perpl/) (requires-python:>=3.11) 2024-07-01T13:43:54,375 Found link https://files.pythonhosted.org/packages/ff/8e/61869e171b51a4c79a43e5f70040aa474a7396e94411fee722df0e07fac4/perpl-0.3.2.tar.gz (from https://pypi.org/simple/perpl/) (requires-python:>=3.11), version: 0.3.2 2024-07-01T13:43:54,375 Skipping link: No binaries permitted for perpl: https://files.pythonhosted.org/packages/29/3a/6498c2bb8d178d5d2fc785809483a871fe097a7b1cb094c90e0c66a188aa/perpl-1.0.0-py3-none-any.whl (from https://pypi.org/simple/perpl/) (requires-python:>=3.11) 2024-07-01T13:43:54,376 Found link https://files.pythonhosted.org/packages/f0/0a/f33c92529ffac58928dbb6156dacdd0292dd217bb068e0e3bd4b09d4ef69/perpl-1.0.0.tar.gz (from https://pypi.org/simple/perpl/) (requires-python:>=3.11), version: 1.0.0 2024-07-01T13:43:54,377 Fetching project page and analyzing links: https://www.piwheels.org/simple/perpl/ 2024-07-01T13:43:54,378 Getting page https://www.piwheels.org/simple/perpl/ 2024-07-01T13:43:54,379 Found index url https://www.piwheels.org/simple/ 2024-07-01T13:43:54,566 Fetched page https://www.piwheels.org/simple/perpl/ as text/html 2024-07-01T13:43:54,569 Skipping link: No binaries permitted for perpl: https://www.piwheels.org/simple/perpl/perpl-0.3.2-py3-none-any.whl#sha256=d000d326064b7cf9bb78bac3ad1b19b9e107b2a2c90ce63e43f68fb647b2d550 (from https://www.piwheels.org/simple/perpl/) (requires-python:>=3.11) 2024-07-01T13:43:54,569 Skipping link: No binaries permitted for perpl: https://www.piwheels.org/simple/perpl/perpl-0.3.1-py3-none-any.whl#sha256=429e2b0f591e6be0f5f3421ed7922a3d28ace437182c1563302d24d0bf7a5454 (from https://www.piwheels.org/simple/perpl/) (requires-python:>=3.11) 2024-07-01T13:43:54,570 Skipping link: No binaries permitted for perpl: https://www.piwheels.org/simple/perpl/perpl-0.3.0-py3-none-any.whl#sha256=d35437be4d2bacd588ae5db43d54925d305c66568a4d6ab48aacf11d30a4a2e8 (from https://www.piwheels.org/simple/perpl/) (requires-python:>=3.11) 2024-07-01T13:43:54,571 Skipping link: not a file: https://www.piwheels.org/simple/perpl/ 2024-07-01T13:43:54,571 Skipping link: not a file: https://pypi.org/simple/perpl/ 2024-07-01T13:43:54,591 Given no hashes to check 1 links for project 'perpl': discarding no candidates 2024-07-01T13:43:54,610 Collecting perpl==1.0.0 2024-07-01T13:43:54,613 Created temporary directory: /tmp/pip-unpack-9wlufqpg 2024-07-01T13:43:54,834 Downloading perpl-1.0.0.tar.gz (1.1 MB) 2024-07-01T13:43:55,192 Added perpl==1.0.0 from https://files.pythonhosted.org/packages/f0/0a/f33c92529ffac58928dbb6156dacdd0292dd217bb068e0e3bd4b09d4ef69/perpl-1.0.0.tar.gz to build tracker '/tmp/pip-build-tracker-gci7qbj3' 2024-07-01T13:43:55,198 Created temporary directory: /tmp/pip-build-env-map6ayuv 2024-07-01T13:43:55,203 Installing build dependencies: started 2024-07-01T13:43:55,204 Running command pip subprocess to install build dependencies 2024-07-01T13:43:56,373 Using pip 24.0 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11) 2024-07-01T13:43:56,907 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-07-01T13:43:58,365 Collecting setuptools>=64.0 2024-07-01T13:43:58,393 Using cached https://www.piwheels.org/simple/setuptools/setuptools-70.1.1-py3-none-any.whl (883 kB) 2024-07-01T13:43:58,700 Collecting setuptools-scm>=8.0 2024-07-01T13:43:58,715 Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-8.1.0-py3-none-any.whl (43 kB) 2024-07-01T13:43:59,040 Collecting packaging>=20 (from setuptools-scm>=8.0) 2024-07-01T13:43:59,055 Using cached https://www.piwheels.org/simple/packaging/packaging-24.1-py3-none-any.whl (53 kB) 2024-07-01T13:44:01,595 Installing collected packages: setuptools, packaging, setuptools-scm 2024-07-01T13:44:04,352 Successfully installed packaging-24.1 setuptools-70.1.1 setuptools-scm-8.1.0 2024-07-01T13:44:04,708 [notice] A new release of pip is available: 24.0 -> 24.1 2024-07-01T13:44:04,709 [notice] To update, run: python3 -m pip install --upgrade pip 2024-07-01T13:44:04,990 Installing build dependencies: finished with status 'done' 2024-07-01T13:44:04,993 Getting requirements to build wheel: started 2024-07-01T13:44:04,994 Running command Getting requirements to build wheel 2024-07-01T13:44:05,846 running egg_info 2024-07-01T13:44:05,851 writing src/perpl.egg-info/PKG-INFO 2024-07-01T13:44:05,854 writing dependency_links to src/perpl.egg-info/dependency_links.txt 2024-07-01T13:44:05,856 writing entry points to src/perpl.egg-info/entry_points.txt 2024-07-01T13:44:05,858 writing requirements to src/perpl.egg-info/requires.txt 2024-07-01T13:44:05,859 writing top-level names to src/perpl.egg-info/top_level.txt 2024-07-01T13:44:05,897 ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any 2024-07-01T13:44:05,902 reading manifest file 'src/perpl.egg-info/SOURCES.txt' 2024-07-01T13:44:05,908 writing manifest file 'src/perpl.egg-info/SOURCES.txt' 2024-07-01T13:44:06,029 Getting requirements to build wheel: finished with status 'done' 2024-07-01T13:44:06,033 Created temporary directory: /tmp/pip-modern-metadata-l9jjdust 2024-07-01T13:44:06,035 Preparing metadata (pyproject.toml): started 2024-07-01T13:44:06,036 Running command Preparing metadata (pyproject.toml) 2024-07-01T13:44:06,843 running dist_info 2024-07-01T13:44:06,848 creating /tmp/pip-modern-metadata-l9jjdust/perpl.egg-info 2024-07-01T13:44:06,854 writing /tmp/pip-modern-metadata-l9jjdust/perpl.egg-info/PKG-INFO 2024-07-01T13:44:06,857 writing dependency_links to /tmp/pip-modern-metadata-l9jjdust/perpl.egg-info/dependency_links.txt 2024-07-01T13:44:06,859 writing entry points to /tmp/pip-modern-metadata-l9jjdust/perpl.egg-info/entry_points.txt 2024-07-01T13:44:06,861 writing requirements to /tmp/pip-modern-metadata-l9jjdust/perpl.egg-info/requires.txt 2024-07-01T13:44:06,862 writing top-level names to /tmp/pip-modern-metadata-l9jjdust/perpl.egg-info/top_level.txt 2024-07-01T13:44:06,864 writing manifest file '/tmp/pip-modern-metadata-l9jjdust/perpl.egg-info/SOURCES.txt' 2024-07-01T13:44:06,898 ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any 2024-07-01T13:44:06,901 reading manifest file '/tmp/pip-modern-metadata-l9jjdust/perpl.egg-info/SOURCES.txt' 2024-07-01T13:44:06,905 writing manifest file '/tmp/pip-modern-metadata-l9jjdust/perpl.egg-info/SOURCES.txt' 2024-07-01T13:44:06,906 creating '/tmp/pip-modern-metadata-l9jjdust/perpl-1.0.0.dist-info' 2024-07-01T13:44:07,060 Preparing metadata (pyproject.toml): finished with status 'done' 2024-07-01T13:44:07,065 Source in /tmp/pip-wheel-0ssvs3pr/perpl_6f1174dd64674b25b2c74e50d52572d8 has version 1.0.0, which satisfies requirement perpl==1.0.0 from https://files.pythonhosted.org/packages/f0/0a/f33c92529ffac58928dbb6156dacdd0292dd217bb068e0e3bd4b09d4ef69/perpl-1.0.0.tar.gz 2024-07-01T13:44:07,066 Removed perpl==1.0.0 from https://files.pythonhosted.org/packages/f0/0a/f33c92529ffac58928dbb6156dacdd0292dd217bb068e0e3bd4b09d4ef69/perpl-1.0.0.tar.gz from build tracker '/tmp/pip-build-tracker-gci7qbj3' 2024-07-01T13:44:07,072 Created temporary directory: /tmp/pip-unpack-zj4c8i4n 2024-07-01T13:44:07,073 Created temporary directory: /tmp/pip-unpack-4pprmv43 2024-07-01T13:44:07,085 Building wheels for collected packages: perpl 2024-07-01T13:44:07,089 Created temporary directory: /tmp/pip-wheel-6h0l38y_ 2024-07-01T13:44:07,090 Destination directory: /tmp/pip-wheel-6h0l38y_ 2024-07-01T13:44:07,092 Building wheel for perpl (pyproject.toml): started 2024-07-01T13:44:07,093 Running command Building wheel for perpl (pyproject.toml) 2024-07-01T13:44:07,865 running bdist_wheel 2024-07-01T13:44:07,885 running build 2024-07-01T13:44:07,886 running build_py 2024-07-01T13:44:07,891 creating build 2024-07-01T13:44:07,891 creating build/lib 2024-07-01T13:44:07,892 creating build/lib/perpl 2024-07-01T13:44:07,893 copying src/perpl/rot_2d_symm_fit.py -> build/lib/perpl 2024-07-01T13:44:07,896 copying src/perpl/__init__.py -> build/lib/perpl 2024-07-01T13:44:07,898 copying src/perpl/relative_positions.py -> build/lib/perpl 2024-07-01T13:44:07,902 creating build/lib/perpl/io 2024-07-01T13:44:07,903 copying src/perpl/io/utils.py -> build/lib/perpl/io 2024-07-01T13:44:07,905 copying src/perpl/io/reports.py -> build/lib/perpl/io 2024-07-01T13:44:07,907 copying src/perpl/io/__init__.py -> build/lib/perpl/io 2024-07-01T13:44:07,909 copying src/perpl/io/plotting.py -> build/lib/perpl/io 2024-07-01T13:44:07,912 creating build/lib/perpl/statistics 2024-07-01T13:44:07,913 copying src/perpl/statistics/modelstats.py -> build/lib/perpl/statistics 2024-07-01T13:44:07,915 creating build/lib/perpl/modelling 2024-07-01T13:44:07,916 copying src/perpl/modelling/polyhedramodelling.py -> build/lib/perpl/modelling 2024-07-01T13:44:07,919 copying src/perpl/modelling/centriole_analysis.py -> build/lib/perpl/modelling 2024-07-01T13:44:07,922 copying src/perpl/modelling/two_layer_fitting.py -> build/lib/perpl/modelling 2024-07-01T13:44:07,925 copying src/perpl/modelling/models_2d_distances_normalised.py -> build/lib/perpl/modelling 2024-07-01T13:44:07,927 copying src/perpl/modelling/zdisk_modelling.py -> build/lib/perpl/modelling 2024-07-01T13:44:07,930 copying src/perpl/modelling/background_models.py -> build/lib/perpl/modelling 2024-07-01T13:44:07,932 copying src/perpl/modelling/zdisk_plots.py -> build/lib/perpl/modelling 2024-07-01T13:44:07,935 copying src/perpl/modelling/__init__.py -> build/lib/perpl/modelling 2024-07-01T13:44:07,937 copying src/perpl/modelling/linearrepeatmodels.py -> build/lib/perpl/modelling 2024-07-01T13:44:07,939 copying src/perpl/modelling/modelling_general.py -> build/lib/perpl/modelling 2024-07-01T13:44:07,942 copying src/perpl/modelling/dna_paint_data_fitting.py -> build/lib/perpl/modelling 2024-07-01T13:44:07,944 running egg_info 2024-07-01T13:44:07,949 writing src/perpl.egg-info/PKG-INFO 2024-07-01T13:44:07,952 writing dependency_links to src/perpl.egg-info/dependency_links.txt 2024-07-01T13:44:07,954 writing entry points to src/perpl.egg-info/entry_points.txt 2024-07-01T13:44:07,955 writing requirements to src/perpl.egg-info/requires.txt 2024-07-01T13:44:07,956 writing top-level names to src/perpl.egg-info/top_level.txt 2024-07-01T13:44:07,983 ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any 2024-07-01T13:44:07,985 reading manifest file 'src/perpl.egg-info/SOURCES.txt' 2024-07-01T13:44:07,990 writing manifest file 'src/perpl.egg-info/SOURCES.txt' 2024-07-01T13:44:07,994 copying src/perpl/statistics/__init.py__ -> build/lib/perpl/statistics 2024-07-01T13:44:08,005 installing to build/bdist.linux-armv7l/wheel 2024-07-01T13:44:08,006 running install 2024-07-01T13:44:08,030 running install_lib 2024-07-01T13:44:08,035 creating build/bdist.linux-armv7l 2024-07-01T13:44:08,035 creating build/bdist.linux-armv7l/wheel 2024-07-01T13:44:08,037 creating build/bdist.linux-armv7l/wheel/perpl 2024-07-01T13:44:08,038 copying build/lib/perpl/rot_2d_symm_fit.py -> build/bdist.linux-armv7l/wheel/perpl 2024-07-01T13:44:08,042 creating build/bdist.linux-armv7l/wheel/perpl/io 2024-07-01T13:44:08,043 copying build/lib/perpl/io/utils.py -> build/bdist.linux-armv7l/wheel/perpl/io 2024-07-01T13:44:08,045 copying build/lib/perpl/io/reports.py -> build/bdist.linux-armv7l/wheel/perpl/io 2024-07-01T13:44:08,048 copying build/lib/perpl/io/__init__.py -> build/bdist.linux-armv7l/wheel/perpl/io 2024-07-01T13:44:08,049 copying build/lib/perpl/io/plotting.py -> build/bdist.linux-armv7l/wheel/perpl/io 2024-07-01T13:44:08,052 copying build/lib/perpl/__init__.py -> build/bdist.linux-armv7l/wheel/perpl 2024-07-01T13:44:08,053 creating build/bdist.linux-armv7l/wheel/perpl/statistics 2024-07-01T13:44:08,054 copying build/lib/perpl/statistics/modelstats.py -> build/bdist.linux-armv7l/wheel/perpl/statistics 2024-07-01T13:44:08,056 copying build/lib/perpl/statistics/__init.py__ -> build/bdist.linux-armv7l/wheel/perpl/statistics 2024-07-01T13:44:08,058 creating build/bdist.linux-armv7l/wheel/perpl/modelling 2024-07-01T13:44:08,059 copying build/lib/perpl/modelling/polyhedramodelling.py -> build/bdist.linux-armv7l/wheel/perpl/modelling 2024-07-01T13:44:08,062 copying build/lib/perpl/modelling/centriole_analysis.py -> build/bdist.linux-armv7l/wheel/perpl/modelling 2024-07-01T13:44:08,065 copying build/lib/perpl/modelling/two_layer_fitting.py -> build/bdist.linux-armv7l/wheel/perpl/modelling 2024-07-01T13:44:08,068 copying build/lib/perpl/modelling/models_2d_distances_normalised.py -> build/bdist.linux-armv7l/wheel/perpl/modelling 2024-07-01T13:44:08,070 copying build/lib/perpl/modelling/zdisk_modelling.py -> build/bdist.linux-armv7l/wheel/perpl/modelling 2024-07-01T13:44:08,073 copying build/lib/perpl/modelling/background_models.py -> build/bdist.linux-armv7l/wheel/perpl/modelling 2024-07-01T13:44:08,075 copying build/lib/perpl/modelling/zdisk_plots.py -> build/bdist.linux-armv7l/wheel/perpl/modelling 2024-07-01T13:44:08,078 copying build/lib/perpl/modelling/__init__.py -> build/bdist.linux-armv7l/wheel/perpl/modelling 2024-07-01T13:44:08,079 copying build/lib/perpl/modelling/linearrepeatmodels.py -> build/bdist.linux-armv7l/wheel/perpl/modelling 2024-07-01T13:44:08,082 copying build/lib/perpl/modelling/modelling_general.py -> build/bdist.linux-armv7l/wheel/perpl/modelling 2024-07-01T13:44:08,084 copying build/lib/perpl/modelling/dna_paint_data_fitting.py -> build/bdist.linux-armv7l/wheel/perpl/modelling 2024-07-01T13:44:08,087 copying build/lib/perpl/relative_positions.py -> build/bdist.linux-armv7l/wheel/perpl 2024-07-01T13:44:08,090 running install_egg_info 2024-07-01T13:44:08,095 Copying src/perpl.egg-info to build/bdist.linux-armv7l/wheel/perpl-1.0.0-py3.11.egg-info 2024-07-01T13:44:08,106 running install_scripts 2024-07-01T13:44:08,122 creating build/bdist.linux-armv7l/wheel/perpl-1.0.0.dist-info/WHEEL 2024-07-01T13:44:08,124 creating '/tmp/pip-wheel-6h0l38y_/.tmp-1rzczchb/perpl-1.0.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-07-01T13:44:08,126 adding 'perpl/__init__.py' 2024-07-01T13:44:08,131 adding 'perpl/relative_positions.py' 2024-07-01T13:44:08,137 adding 'perpl/rot_2d_symm_fit.py' 2024-07-01T13:44:08,138 adding 'perpl/io/__init__.py' 2024-07-01T13:44:08,141 adding 'perpl/io/plotting.py' 2024-07-01T13:44:08,144 adding 'perpl/io/reports.py' 2024-07-01T13:44:08,146 adding 'perpl/io/utils.py' 2024-07-01T13:44:08,147 adding 'perpl/modelling/__init__.py' 2024-07-01T13:44:08,149 adding 'perpl/modelling/background_models.py' 2024-07-01T13:44:08,153 adding 'perpl/modelling/centriole_analysis.py' 2024-07-01T13:44:08,157 adding 'perpl/modelling/dna_paint_data_fitting.py' 2024-07-01T13:44:08,160 adding 'perpl/modelling/linearrepeatmodels.py' 2024-07-01T13:44:08,163 adding 'perpl/modelling/modelling_general.py' 2024-07-01T13:44:08,164 adding 'perpl/modelling/models_2d_distances_normalised.py' 2024-07-01T13:44:08,167 adding 'perpl/modelling/polyhedramodelling.py' 2024-07-01T13:44:08,169 adding 'perpl/modelling/two_layer_fitting.py' 2024-07-01T13:44:08,173 adding 'perpl/modelling/zdisk_modelling.py' 2024-07-01T13:44:08,176 adding 'perpl/modelling/zdisk_plots.py' 2024-07-01T13:44:08,178 adding 'perpl/statistics/__init.py__' 2024-07-01T13:44:08,179 adding 'perpl/statistics/modelstats.py' 2024-07-01T13:44:08,182 adding 'perpl-1.0.0.dist-info/METADATA' 2024-07-01T13:44:08,183 adding 'perpl-1.0.0.dist-info/WHEEL' 2024-07-01T13:44:08,184 adding 'perpl-1.0.0.dist-info/entry_points.txt' 2024-07-01T13:44:08,185 adding 'perpl-1.0.0.dist-info/top_level.txt' 2024-07-01T13:44:08,186 adding 'perpl-1.0.0.dist-info/RECORD' 2024-07-01T13:44:08,188 removing build/bdist.linux-armv7l/wheel 2024-07-01T13:44:08,318 Building wheel for perpl (pyproject.toml): finished with status 'done' 2024-07-01T13:44:08,324 Created wheel for perpl: filename=perpl-1.0.0-py3-none-any.whl size=89531 sha256=6bba4a91e94a4e9eafb313de6d438de110e03e3b29b1965cc441e071a35fe105 2024-07-01T13:44:08,325 Stored in directory: /tmp/pip-ephem-wheel-cache-0_odc6p3/wheels/f4/97/fd/1d5fb38d3669f6c90af6c39ef480a6c96656619a40961e549e 2024-07-01T13:44:08,337 Successfully built perpl 2024-07-01T13:44:08,343 Removed build tracker: '/tmp/pip-build-tracker-gci7qbj3'