2024-07-20T09:40:08,137 Created temporary directory: /tmp/pip-build-tracker-z4re01xt
2024-07-20T09:40:08,138 Initialized build tracking at /tmp/pip-build-tracker-z4re01xt
2024-07-20T09:40:08,139 Created build tracker: /tmp/pip-build-tracker-z4re01xt
2024-07-20T09:40:08,139 Entered build tracker: /tmp/pip-build-tracker-z4re01xt
2024-07-20T09:40:08,139 Created temporary directory: /tmp/pip-wheel-j595wls4
2024-07-20T09:40:08,143 Created temporary directory: /tmp/pip-ephem-wheel-cache-5pfi83w2
2024-07-20T09:40:08,167 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2024-07-20T09:40:08,171 2 location(s) to search for versions of bigphase:
2024-07-20T09:40:08,171 * https://pypi.org/simple/bigphase/
2024-07-20T09:40:08,171 * https://www.piwheels.org/simple/bigphase/
2024-07-20T09:40:08,171 Fetching project page and analyzing links: https://pypi.org/simple/bigphase/
2024-07-20T09:40:08,172 Getting page https://pypi.org/simple/bigphase/
2024-07-20T09:40:08,174 Found index url https://pypi.org/simple/
2024-07-20T09:40:08,225 Fetched page https://pypi.org/simple/bigphase/ as application/vnd.pypi.simple.v1+json
2024-07-20T09:40:08,226   Found link https://files.pythonhosted.org/packages/a0/71/7839c0a22ba5cd0ac7768ac47b4cec82865f1fb0ef43b548cb79be88328b/bigphase-0.1.0.tar.gz (from https://pypi.org/simple/bigphase/), version: 0.1.0
2024-07-20T09:40:08,226   Found link https://files.pythonhosted.org/packages/50/8b/c53eaeb389ff9b6aa6eab1f861d875fd056f89443e6a029a0d6f2419d46c/bigphase-0.1.1.tar.gz (from https://pypi.org/simple/bigphase/), version: 0.1.1
2024-07-20T09:40:08,226 Fetching project page and analyzing links: https://www.piwheels.org/simple/bigphase/
2024-07-20T09:40:08,227 Getting page https://www.piwheels.org/simple/bigphase/
2024-07-20T09:40:08,228 Found index url https://www.piwheels.org/simple/
2024-07-20T09:40:08,294 Fetched page https://www.piwheels.org/simple/bigphase/ as text/html
2024-07-20T09:40:08,297   Skipping link: No binaries permitted for bigphase: https://www.piwheels.org/simple/bigphase/BigphASE-0.1.1-cp311-cp311-linux_armv6l.whl#sha256=a2ccfb0a324109f26c210cb3a9c63f82446370a03b6d184e03d2c81d61f67aa9 (from https://www.piwheels.org/simple/bigphase/)
2024-07-20T09:40:08,297   Skipping link: No binaries permitted for bigphase: https://www.piwheels.org/simple/bigphase/BigphASE-0.1.1-cp311-cp311-linux_armv7l.whl#sha256=a2ccfb0a324109f26c210cb3a9c63f82446370a03b6d184e03d2c81d61f67aa9 (from https://www.piwheels.org/simple/bigphase/)
2024-07-20T09:40:08,297   Skipping link: No binaries permitted for bigphase: https://www.piwheels.org/simple/bigphase/BigphASE-0.1.0-cp39-cp39-linux_armv6l.whl#sha256=0e6881ebbedd3f710e7e7ba01d62a9a975ba63d051f6a468a9c0f3503cafd156 (from https://www.piwheels.org/simple/bigphase/)
2024-07-20T09:40:08,297   Skipping link: No binaries permitted for bigphase: https://www.piwheels.org/simple/bigphase/BigphASE-0.1.0-cp39-cp39-linux_armv7l.whl#sha256=0e6881ebbedd3f710e7e7ba01d62a9a975ba63d051f6a468a9c0f3503cafd156 (from https://www.piwheels.org/simple/bigphase/)
2024-07-20T09:40:08,298 Skipping link: not a file: https://www.piwheels.org/simple/bigphase/
2024-07-20T09:40:08,298 Skipping link: not a file: https://pypi.org/simple/bigphase/
2024-07-20T09:40:08,315 Given no hashes to check 1 links for project 'bigphase': discarding no candidates
2024-07-20T09:40:08,332 Collecting bigphase==0.1.1
2024-07-20T09:40:08,334   Created temporary directory: /tmp/pip-unpack-tbd1b87x
2024-07-20T09:40:08,377   Downloading bigphase-0.1.1.tar.gz (125 kB)
2024-07-20T09:40:08,483   Added bigphase==0.1.1 from https://files.pythonhosted.org/packages/50/8b/c53eaeb389ff9b6aa6eab1f861d875fd056f89443e6a029a0d6f2419d46c/bigphase-0.1.1.tar.gz to build tracker '/tmp/pip-build-tracker-z4re01xt'
2024-07-20T09:40:08,485   Running setup.py (path:/tmp/pip-wheel-j595wls4/bigphase_99f5d2f2bd724ed6ab7d03409d177401/setup.py) egg_info for package bigphase
2024-07-20T09:40:08,485   Created temporary directory: /tmp/pip-pip-egg-info-_67v66oq
2024-07-20T09:40:08,486   Preparing metadata (setup.py): started
2024-07-20T09:40:08,487   Running command python setup.py egg_info
2024-07-20T09:40:09,569   running egg_info
2024-07-20T09:40:09,573   creating /tmp/pip-pip-egg-info-_67v66oq/BigphASE.egg-info
2024-07-20T09:40:09,597   writing /tmp/pip-pip-egg-info-_67v66oq/BigphASE.egg-info/PKG-INFO
2024-07-20T09:40:09,600   writing dependency_links to /tmp/pip-pip-egg-info-_67v66oq/BigphASE.egg-info/dependency_links.txt
2024-07-20T09:40:09,602   writing top-level names to /tmp/pip-pip-egg-info-_67v66oq/BigphASE.egg-info/top_level.txt
2024-07-20T09:40:09,604   writing manifest file '/tmp/pip-pip-egg-info-_67v66oq/BigphASE.egg-info/SOURCES.txt'
2024-07-20T09:40:09,692   reading manifest file '/tmp/pip-pip-egg-info-_67v66oq/BigphASE.egg-info/SOURCES.txt'
2024-07-20T09:40:09,693   reading manifest template 'MANIFEST.in'
2024-07-20T09:40:09,701   adding license file 'LICENSE'
2024-07-20T09:40:09,703   writing manifest file '/tmp/pip-pip-egg-info-_67v66oq/BigphASE.egg-info/SOURCES.txt'
2024-07-20T09:40:09,798   Preparing metadata (setup.py): finished with status 'done'
2024-07-20T09:40:09,802   Source in /tmp/pip-wheel-j595wls4/bigphase_99f5d2f2bd724ed6ab7d03409d177401 has version 0.1.1, which satisfies requirement bigphase==0.1.1 from https://files.pythonhosted.org/packages/50/8b/c53eaeb389ff9b6aa6eab1f861d875fd056f89443e6a029a0d6f2419d46c/bigphase-0.1.1.tar.gz
2024-07-20T09:40:09,803   Removed bigphase==0.1.1 from https://files.pythonhosted.org/packages/50/8b/c53eaeb389ff9b6aa6eab1f861d875fd056f89443e6a029a0d6f2419d46c/bigphase-0.1.1.tar.gz from build tracker '/tmp/pip-build-tracker-z4re01xt'
2024-07-20T09:40:09,808 Created temporary directory: /tmp/pip-unpack-nn14bxyi
2024-07-20T09:40:09,808 Created temporary directory: /tmp/pip-unpack-vgnz6tdu
2024-07-20T09:40:09,810 Building wheels for collected packages: bigphase
2024-07-20T09:40:09,814   Created temporary directory: /tmp/pip-wheel-lni98b2m
2024-07-20T09:40:09,814   Building wheel for bigphase (setup.py): started
2024-07-20T09:40:09,815   Destination directory: /tmp/pip-wheel-lni98b2m
2024-07-20T09:40:09,816   Running command python setup.py bdist_wheel
2024-07-20T09:40:10,873   running bdist_wheel
2024-07-20T09:40:10,947   running build
2024-07-20T09:40:10,948   running build_py
2024-07-20T09:40:10,974   creating build
2024-07-20T09:40:10,975   creating build/lib.linux-armv7l-cpython-39
2024-07-20T09:40:10,976   creating build/lib.linux-armv7l-cpython-39/BigphASE
2024-07-20T09:40:10,977   copying src/BigphASE/options.py -> build/lib.linux-armv7l-cpython-39/BigphASE
2024-07-20T09:40:10,979   copying src/BigphASE/maker.py -> build/lib.linux-armv7l-cpython-39/BigphASE
2024-07-20T09:40:10,981   copying src/BigphASE/__init__.py -> build/lib.linux-armv7l-cpython-39/BigphASE
2024-07-20T09:40:10,983   copying src/BigphASE/utils.py -> build/lib.linux-armv7l-cpython-39/BigphASE
2024-07-20T09:40:10,985   running egg_info
2024-07-20T09:40:11,042   writing src/BigphASE.egg-info/PKG-INFO
2024-07-20T09:40:11,046   writing dependency_links to src/BigphASE.egg-info/dependency_links.txt
2024-07-20T09:40:11,048   writing top-level names to src/BigphASE.egg-info/top_level.txt
2024-07-20T09:40:11,076   reading manifest file 'src/BigphASE.egg-info/SOURCES.txt'
2024-07-20T09:40:11,078   reading manifest template 'MANIFEST.in'
2024-07-20T09:40:11,085   adding license file 'LICENSE'
2024-07-20T09:40:11,088   writing manifest file 'src/BigphASE.egg-info/SOURCES.txt'
2024-07-20T09:40:11,090   /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'BigphASE.delta2hap' is absent from the `packages` configuration.
2024-07-20T09:40:11,090   !!

2024-07-20T09:40:11,091           ********************************************************************************
2024-07-20T09:40:11,091           ############################
2024-07-20T09:40:11,091           # Package would be ignored #
2024-07-20T09:40:11,091           ############################
2024-07-20T09:40:11,091           Python recognizes 'BigphASE.delta2hap' as an importable package[^1],
2024-07-20T09:40:11,091           but it is absent from setuptools' `packages` configuration.

2024-07-20T09:40:11,092           This leads to an ambiguous overall configuration. If you want to distribute this
2024-07-20T09:40:11,092           package, please make sure that 'BigphASE.delta2hap' is explicitly added
2024-07-20T09:40:11,092           to the `packages` configuration field.

2024-07-20T09:40:11,092           Alternatively, you can also rely on setuptools' discovery methods
2024-07-20T09:40:11,092           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-07-20T09:40:11,092           instead of `find_packages(...)`/`find:`).

2024-07-20T09:40:11,093           You can read more about "package discovery" on setuptools documentation page:

2024-07-20T09:40:11,093           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-07-20T09:40:11,093           If you don't want 'BigphASE.delta2hap' to be distributed and are
2024-07-20T09:40:11,093           already explicitly excluding 'BigphASE.delta2hap' via
2024-07-20T09:40:11,093           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-07-20T09:40:11,093           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-07-20T09:40:11,094           combination with a more fine grained `package-data` configuration.

2024-07-20T09:40:11,094           You can read more about "package data files" on setuptools documentation page:

2024-07-20T09:40:11,094           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-07-20T09:40:11,094           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-07-20T09:40:11,095                 even if it does not contain any `.py` files.
2024-07-20T09:40:11,095                 On the other hand, currently there is no concept of package data
2024-07-20T09:40:11,095                 directory, all directories are treated like packages.
2024-07-20T09:40:11,095           ********************************************************************************

2024-07-20T09:40:11,095   !!
2024-07-20T09:40:11,096     check.warn(importable)
2024-07-20T09:40:11,096   /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'BigphASE.delta2hap.bin' is absent from the `packages` configuration.
2024-07-20T09:40:11,096   !!

2024-07-20T09:40:11,096           ********************************************************************************
2024-07-20T09:40:11,096           ############################
2024-07-20T09:40:11,097           # Package would be ignored #
2024-07-20T09:40:11,097           ############################
2024-07-20T09:40:11,097           Python recognizes 'BigphASE.delta2hap.bin' as an importable package[^1],
2024-07-20T09:40:11,097           but it is absent from setuptools' `packages` configuration.

2024-07-20T09:40:11,097           This leads to an ambiguous overall configuration. If you want to distribute this
2024-07-20T09:40:11,098           package, please make sure that 'BigphASE.delta2hap.bin' is explicitly added
2024-07-20T09:40:11,098           to the `packages` configuration field.

2024-07-20T09:40:11,098           Alternatively, you can also rely on setuptools' discovery methods
2024-07-20T09:40:11,098           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-07-20T09:40:11,098           instead of `find_packages(...)`/`find:`).

2024-07-20T09:40:11,099           You can read more about "package discovery" on setuptools documentation page:

2024-07-20T09:40:11,099           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-07-20T09:40:11,099           If you don't want 'BigphASE.delta2hap.bin' to be distributed and are
2024-07-20T09:40:11,099           already explicitly excluding 'BigphASE.delta2hap.bin' via
2024-07-20T09:40:11,100           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-07-20T09:40:11,100           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-07-20T09:40:11,100           combination with a more fine grained `package-data` configuration.

2024-07-20T09:40:11,100           You can read more about "package data files" on setuptools documentation page:

2024-07-20T09:40:11,100           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-07-20T09:40:11,101           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-07-20T09:40:11,101                 even if it does not contain any `.py` files.
2024-07-20T09:40:11,101                 On the other hand, currently there is no concept of package data
2024-07-20T09:40:11,101                 directory, all directories are treated like packages.
2024-07-20T09:40:11,101           ********************************************************************************

2024-07-20T09:40:11,102   !!
2024-07-20T09:40:11,102     check.warn(importable)
2024-07-20T09:40:11,103   /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'BigphASE.delta2hap.include' is absent from the `packages` configuration.
2024-07-20T09:40:11,103   !!

2024-07-20T09:40:11,104           ********************************************************************************
2024-07-20T09:40:11,105           ############################
2024-07-20T09:40:11,105           # Package would be ignored #
2024-07-20T09:40:11,105           ############################
2024-07-20T09:40:11,105           Python recognizes 'BigphASE.delta2hap.include' as an importable package[^1],
2024-07-20T09:40:11,105           but it is absent from setuptools' `packages` configuration.

2024-07-20T09:40:11,106           This leads to an ambiguous overall configuration. If you want to distribute this
2024-07-20T09:40:11,106           package, please make sure that 'BigphASE.delta2hap.include' is explicitly added
2024-07-20T09:40:11,106           to the `packages` configuration field.

2024-07-20T09:40:11,106           Alternatively, you can also rely on setuptools' discovery methods
2024-07-20T09:40:11,106           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-07-20T09:40:11,107           instead of `find_packages(...)`/`find:`).

2024-07-20T09:40:11,107           You can read more about "package discovery" on setuptools documentation page:

2024-07-20T09:40:11,107           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-07-20T09:40:11,108           If you don't want 'BigphASE.delta2hap.include' to be distributed and are
2024-07-20T09:40:11,108           already explicitly excluding 'BigphASE.delta2hap.include' via
2024-07-20T09:40:11,108           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-07-20T09:40:11,108           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-07-20T09:40:11,108           combination with a more fine grained `package-data` configuration.

2024-07-20T09:40:11,108           You can read more about "package data files" on setuptools documentation page:

2024-07-20T09:40:11,109           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-07-20T09:40:11,109           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-07-20T09:40:11,110                 even if it does not contain any `.py` files.
2024-07-20T09:40:11,110                 On the other hand, currently there is no concept of package data
2024-07-20T09:40:11,110                 directory, all directories are treated like packages.
2024-07-20T09:40:11,110           ********************************************************************************

2024-07-20T09:40:11,110   !!
2024-07-20T09:40:11,110     check.warn(importable)
2024-07-20T09:40:11,111   /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'BigphASE.delta2hap.src' is absent from the `packages` configuration.
2024-07-20T09:40:11,111   !!

2024-07-20T09:40:11,111           ********************************************************************************
2024-07-20T09:40:11,111           ############################
2024-07-20T09:40:11,111           # Package would be ignored #
2024-07-20T09:40:11,112           ############################
2024-07-20T09:40:11,112           Python recognizes 'BigphASE.delta2hap.src' as an importable package[^1],
2024-07-20T09:40:11,112           but it is absent from setuptools' `packages` configuration.

2024-07-20T09:40:11,112           This leads to an ambiguous overall configuration. If you want to distribute this
2024-07-20T09:40:11,112           package, please make sure that 'BigphASE.delta2hap.src' is explicitly added
2024-07-20T09:40:11,112           to the `packages` configuration field.

2024-07-20T09:40:11,113           Alternatively, you can also rely on setuptools' discovery methods
2024-07-20T09:40:11,113           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-07-20T09:40:11,113           instead of `find_packages(...)`/`find:`).

2024-07-20T09:40:11,113           You can read more about "package discovery" on setuptools documentation page:

2024-07-20T09:40:11,114           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-07-20T09:40:11,114           If you don't want 'BigphASE.delta2hap.src' to be distributed and are
2024-07-20T09:40:11,114           already explicitly excluding 'BigphASE.delta2hap.src' via
2024-07-20T09:40:11,114           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-07-20T09:40:11,114           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-07-20T09:40:11,115           combination with a more fine grained `package-data` configuration.

2024-07-20T09:40:11,115           You can read more about "package data files" on setuptools documentation page:

2024-07-20T09:40:11,115           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-07-20T09:40:11,116           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-07-20T09:40:11,116                 even if it does not contain any `.py` files.
2024-07-20T09:40:11,116                 On the other hand, currently there is no concept of package data
2024-07-20T09:40:11,116                 directory, all directories are treated like packages.
2024-07-20T09:40:11,116           ********************************************************************************

2024-07-20T09:40:11,117   !!
2024-07-20T09:40:11,117     check.warn(importable)
2024-07-20T09:40:11,117   creating build/lib.linux-armv7l-cpython-39/BigphASE/delta2hap
2024-07-20T09:40:11,117   copying src/BigphASE/delta2hap/CMakeLists.txt -> build/lib.linux-armv7l-cpython-39/BigphASE/delta2hap
2024-07-20T09:40:11,117   creating build/lib.linux-armv7l-cpython-39/BigphASE/delta2hap/bin
2024-07-20T09:40:11,118   copying src/BigphASE/delta2hap/bin/delta2hap -> build/lib.linux-armv7l-cpython-39/BigphASE/delta2hap/bin
2024-07-20T09:40:11,118   creating build/lib.linux-armv7l-cpython-39/BigphASE/delta2hap/include
2024-07-20T09:40:11,118   copying src/BigphASE/delta2hap/include/delta.h -> build/lib.linux-armv7l-cpython-39/BigphASE/delta2hap/include
2024-07-20T09:40:11,118   copying src/BigphASE/delta2hap/include/redirect_to_pager.h -> build/lib.linux-armv7l-cpython-39/BigphASE/delta2hap/include
2024-07-20T09:40:11,118   copying src/BigphASE/delta2hap/include/show-vcf.h -> build/lib.linux-armv7l-cpython-39/BigphASE/delta2hap/include
2024-07-20T09:40:11,118   copying src/BigphASE/delta2hap/include/sw_alignscore.h -> build/lib.linux-armv7l-cpython-39/BigphASE/delta2hap/include
2024-07-20T09:40:11,118   copying src/BigphASE/delta2hap/include/tigrinc.h -> build/lib.linux-armv7l-cpython-39/BigphASE/delta2hap/include
2024-07-20T09:40:11,120   copying src/BigphASE/delta2hap/include/translate.h -> build/lib.linux-armv7l-cpython-39/BigphASE/delta2hap/include
2024-07-20T09:40:11,123   creating build/lib.linux-armv7l-cpython-39/BigphASE/delta2hap/src
2024-07-20T09:40:11,124   copying src/BigphASE/delta2hap/src/delta.cpp -> build/lib.linux-armv7l-cpython-39/BigphASE/delta2hap/src
2024-07-20T09:40:11,127   copying src/BigphASE/delta2hap/src/delta2hap.cpp -> build/lib.linux-armv7l-cpython-39/BigphASE/delta2hap/src
2024-07-20T09:40:11,131   copying src/BigphASE/delta2hap/src/tigrinc.cpp -> build/lib.linux-armv7l-cpython-39/BigphASE/delta2hap/src
2024-07-20T09:40:11,133   copying src/BigphASE/delta2hap/src/translate.cpp -> build/lib.linux-armv7l-cpython-39/BigphASE/delta2hap/src
2024-07-20T09:40:11,136   running build_ext
2024-07-20T09:40:11,154   Compiling src/BigphASE/delta2hap/src/delta2hap.cpp...
2024-07-20T09:40:14,287   Compiling src/BigphASE/delta2hap/src/delta.cpp...
2024-07-20T09:40:17,494   Compiling src/BigphASE/delta2hap/src/tigrinc.cpp...
2024-07-20T09:40:17,795   Compiling src/BigphASE/delta2hap/src/translate.cpp...
2024-07-20T09:40:17,924   Linking src/BigphASE/delta2hap/bin/delta2hap...
2024-07-20T09:40:18,454   /usr/local/lib/python3.9/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated.
2024-07-20T09:40:18,454   !!

2024-07-20T09:40:18,455           ********************************************************************************
2024-07-20T09:40:18,455           Please avoid running ``setup.py`` directly.
2024-07-20T09:40:18,455           Instead, use pypa/build, pypa/installer or other
2024-07-20T09:40:18,455           standards-based tools.

2024-07-20T09:40:18,455           See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
2024-07-20T09:40:18,455           ********************************************************************************

2024-07-20T09:40:18,456   !!
2024-07-20T09:40:18,456     self.initialize_options()
2024-07-20T09:40:18,478   installing to build/bdist.linux-armv7l/wheel
2024-07-20T09:40:18,478   running install
2024-07-20T09:40:18,504   running install_lib
2024-07-20T09:40:18,529   creating build/bdist.linux-armv7l
2024-07-20T09:40:18,529   creating build/bdist.linux-armv7l/wheel
2024-07-20T09:40:18,531   creating build/bdist.linux-armv7l/wheel/BigphASE
2024-07-20T09:40:18,532   creating build/bdist.linux-armv7l/wheel/BigphASE/delta2hap
2024-07-20T09:40:18,533   copying build/lib.linux-armv7l-cpython-39/BigphASE/delta2hap/CMakeLists.txt -> build/bdist.linux-armv7l/wheel/BigphASE/delta2hap
2024-07-20T09:40:18,535   creating build/bdist.linux-armv7l/wheel/BigphASE/delta2hap/src
2024-07-20T09:40:18,536   copying build/lib.linux-armv7l-cpython-39/BigphASE/delta2hap/src/translate.cpp -> build/bdist.linux-armv7l/wheel/BigphASE/delta2hap/src
2024-07-20T09:40:18,538   copying build/lib.linux-armv7l-cpython-39/BigphASE/delta2hap/src/delta2hap.cpp -> build/bdist.linux-armv7l/wheel/BigphASE/delta2hap/src
2024-07-20T09:40:18,541   copying build/lib.linux-armv7l-cpython-39/BigphASE/delta2hap/src/delta.cpp -> build/bdist.linux-armv7l/wheel/BigphASE/delta2hap/src
2024-07-20T09:40:18,544   copying build/lib.linux-armv7l-cpython-39/BigphASE/delta2hap/src/tigrinc.cpp -> build/bdist.linux-armv7l/wheel/BigphASE/delta2hap/src
2024-07-20T09:40:18,547   creating build/bdist.linux-armv7l/wheel/BigphASE/delta2hap/bin
2024-07-20T09:40:18,548   copying build/lib.linux-armv7l-cpython-39/BigphASE/delta2hap/bin/delta2hap -> build/bdist.linux-armv7l/wheel/BigphASE/delta2hap/bin
2024-07-20T09:40:18,556   creating build/bdist.linux-armv7l/wheel/BigphASE/delta2hap/include
2024-07-20T09:40:18,557   copying build/lib.linux-armv7l-cpython-39/BigphASE/delta2hap/include/redirect_to_pager.h -> build/bdist.linux-armv7l/wheel/BigphASE/delta2hap/include
2024-07-20T09:40:18,559   copying build/lib.linux-armv7l-cpython-39/BigphASE/delta2hap/include/show-vcf.h -> build/bdist.linux-armv7l/wheel/BigphASE/delta2hap/include
2024-07-20T09:40:18,561   copying build/lib.linux-armv7l-cpython-39/BigphASE/delta2hap/include/sw_alignscore.h -> build/bdist.linux-armv7l/wheel/BigphASE/delta2hap/include
2024-07-20T09:40:18,563   copying build/lib.linux-armv7l-cpython-39/BigphASE/delta2hap/include/tigrinc.h -> build/bdist.linux-armv7l/wheel/BigphASE/delta2hap/include
2024-07-20T09:40:18,565   copying build/lib.linux-armv7l-cpython-39/BigphASE/delta2hap/include/delta.h -> build/bdist.linux-armv7l/wheel/BigphASE/delta2hap/include
2024-07-20T09:40:18,567   copying build/lib.linux-armv7l-cpython-39/BigphASE/delta2hap/include/translate.h -> build/bdist.linux-armv7l/wheel/BigphASE/delta2hap/include
2024-07-20T09:40:18,570   copying build/lib.linux-armv7l-cpython-39/BigphASE/options.py -> build/bdist.linux-armv7l/wheel/BigphASE
2024-07-20T09:40:18,572   copying build/lib.linux-armv7l-cpython-39/BigphASE/maker.py -> build/bdist.linux-armv7l/wheel/BigphASE
2024-07-20T09:40:18,574   copying build/lib.linux-armv7l-cpython-39/BigphASE/__init__.py -> build/bdist.linux-armv7l/wheel/BigphASE
2024-07-20T09:40:18,576   copying build/lib.linux-armv7l-cpython-39/BigphASE/utils.py -> build/bdist.linux-armv7l/wheel/BigphASE
2024-07-20T09:40:18,578   running install_egg_info
2024-07-20T09:40:18,608   Copying src/BigphASE.egg-info to build/bdist.linux-armv7l/wheel/BigphASE-0.1.1-py3.9.egg-info
2024-07-20T09:40:18,617   running install_scripts
2024-07-20T09:40:18,619   Removed directory /tmp/pip-wheel-j595wls4/bigphase_99f5d2f2bd724ed6ab7d03409d177401/src/BigphASE/delta2hap/include
2024-07-20T09:40:18,622   Removed directory /tmp/pip-wheel-j595wls4/bigphase_99f5d2f2bd724ed6ab7d03409d177401/src/BigphASE/delta2hap/src
2024-07-20T09:40:18,623   Removed file /tmp/pip-wheel-j595wls4/bigphase_99f5d2f2bd724ed6ab7d03409d177401/src/BigphASE/delta2hap/CMakeLists.txt
2024-07-20T09:40:18,637   adding license file "LICENSE" (matched pattern "LICEN[CS]E*")
2024-07-20T09:40:18,642   creating build/bdist.linux-armv7l/wheel/BigphASE-0.1.1.dist-info/WHEEL
2024-07-20T09:40:18,644   creating '/tmp/pip-wheel-lni98b2m/BigphASE-0.1.1-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2024-07-20T09:40:18,646   adding 'BigphASE/__init__.py'
2024-07-20T09:40:18,649   adding 'BigphASE/maker.py'
2024-07-20T09:40:18,651   adding 'BigphASE/options.py'
2024-07-20T09:40:18,653   adding 'BigphASE/utils.py'
2024-07-20T09:40:18,655   adding 'BigphASE/delta2hap/CMakeLists.txt'
2024-07-20T09:40:18,700   adding 'BigphASE/delta2hap/bin/delta2hap'
2024-07-20T09:40:18,705   adding 'BigphASE/delta2hap/include/delta.h'
2024-07-20T09:40:18,706   adding 'BigphASE/delta2hap/include/redirect_to_pager.h'
2024-07-20T09:40:18,708   adding 'BigphASE/delta2hap/include/show-vcf.h'
2024-07-20T09:40:18,710   adding 'BigphASE/delta2hap/include/sw_alignscore.h'
2024-07-20T09:40:18,711   adding 'BigphASE/delta2hap/include/tigrinc.h'
2024-07-20T09:40:18,713   adding 'BigphASE/delta2hap/include/translate.h'
2024-07-20T09:40:18,718   adding 'BigphASE/delta2hap/src/delta.cpp'
2024-07-20T09:40:18,721   adding 'BigphASE/delta2hap/src/delta2hap.cpp'
2024-07-20T09:40:18,723   adding 'BigphASE/delta2hap/src/tigrinc.cpp'
2024-07-20T09:40:18,724   adding 'BigphASE/delta2hap/src/translate.cpp'
2024-07-20T09:40:18,732   adding 'BigphASE-0.1.1.dist-info/LICENSE'
2024-07-20T09:40:18,734   adding 'BigphASE-0.1.1.dist-info/METADATA'
2024-07-20T09:40:18,735   adding 'BigphASE-0.1.1.dist-info/WHEEL'
2024-07-20T09:40:18,735   adding 'BigphASE-0.1.1.dist-info/top_level.txt'
2024-07-20T09:40:18,736   adding 'BigphASE-0.1.1.dist-info/RECORD'
2024-07-20T09:40:18,740   removing build/bdist.linux-armv7l/wheel
2024-07-20T09:40:18,852   Building wheel for bigphase (setup.py): finished with status 'done'
2024-07-20T09:40:18,857   Created wheel for bigphase: filename=BigphASE-0.1.1-cp39-cp39-linux_armv7l.whl size=127298 sha256=0f5eb54473285f864553f122b9b3fbe9b5a87a9201ff26602ad211d162e06e4d
2024-07-20T09:40:18,858   Stored in directory: /tmp/pip-ephem-wheel-cache-5pfi83w2/wheels/27/0e/e4/e8c2b5dc1d73d9b9fbdb5f8b9c0badfb59aa5f1af0cbdff608
2024-07-20T09:40:18,870 Successfully built bigphase
2024-07-20T09:40:18,879 Removed build tracker: '/tmp/pip-build-tracker-z4re01xt'