2024-10-20T19:39:52,908 Disabling truststore because Python version isn't 3.10+
2024-10-20T19:39:53,386 Created temporary directory: /tmp/pip-build-tracker-3ulntln0
2024-10-20T19:39:53,387 Initialized build tracking at /tmp/pip-build-tracker-3ulntln0
2024-10-20T19:39:53,387 Created build tracker: /tmp/pip-build-tracker-3ulntln0
2024-10-20T19:39:53,388 Entered build tracker: /tmp/pip-build-tracker-3ulntln0
2024-10-20T19:39:53,388 Created temporary directory: /tmp/pip-wheel-j3rzekyj
2024-10-20T19:39:53,394 Created temporary directory: /tmp/pip-ephem-wheel-cache-lfaep6zq
2024-10-20T19:39:53,438 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2024-10-20T19:39:53,440 2 location(s) to search for versions of yxcompgen:
2024-10-20T19:39:53,440 * https://pypi.org/simple/yxcompgen/
2024-10-20T19:39:53,440 * https://www.piwheels.org/simple/yxcompgen/
2024-10-20T19:39:53,441 Fetching project page and analyzing links: https://pypi.org/simple/yxcompgen/
2024-10-20T19:39:53,441 Getting page https://pypi.org/simple/yxcompgen/
2024-10-20T19:39:53,443 Found index url https://pypi.org/simple/
2024-10-20T19:39:53,546 Fetched page https://pypi.org/simple/yxcompgen/ as application/vnd.pypi.simple.v1+json
2024-10-20T19:39:53,547   Skipping link: No binaries permitted for yxcompgen: https://files.pythonhosted.org/packages/73/19/28a0fea799458ae64bbcc2a9cae2678445277ef343fa25f6f70002a1e672/yxcompgen-0.0.1-py3-none-any.whl (from https://pypi.org/simple/yxcompgen/) (requires-python:>=3.5)
2024-10-20T19:39:53,548   Found link https://files.pythonhosted.org/packages/ec/b8/1bf4a95e66a1ab330d5dce87f5e6809e968c6e3e32ce6d2baf028cb6401f/yxcompgen-0.0.1.tar.gz (from https://pypi.org/simple/yxcompgen/) (requires-python:>=3.5), version: 0.0.1
2024-10-20T19:39:53,548 Fetching project page and analyzing links: https://www.piwheels.org/simple/yxcompgen/
2024-10-20T19:39:53,548 Getting page https://www.piwheels.org/simple/yxcompgen/
2024-10-20T19:39:53,549 Found index url https://www.piwheels.org/simple/
2024-10-20T19:39:53,591 Fetched page https://www.piwheels.org/simple/yxcompgen/ as text/html
2024-10-20T19:39:53,592 Skipping link: not a file: https://www.piwheels.org/simple/yxcompgen/
2024-10-20T19:39:53,592 Skipping link: not a file: https://pypi.org/simple/yxcompgen/
2024-10-20T19:39:53,608 Given no hashes to check 1 links for project 'yxcompgen': discarding no candidates
2024-10-20T19:39:53,609 Collecting yxcompgen==0.0.1
2024-10-20T19:39:53,611   Created temporary directory: /tmp/pip-unpack-2x6nju4k
2024-10-20T19:39:53,629   Downloading yxcompgen-0.0.1.tar.gz (71 kB)
2024-10-20T19:39:53,708   Added yxcompgen==0.0.1 from https://files.pythonhosted.org/packages/ec/b8/1bf4a95e66a1ab330d5dce87f5e6809e968c6e3e32ce6d2baf028cb6401f/yxcompgen-0.0.1.tar.gz to build tracker '/tmp/pip-build-tracker-3ulntln0'
2024-10-20T19:39:53,710   Running setup.py (path:/tmp/pip-wheel-j3rzekyj/yxcompgen_1026541ad0494f7ebc801a1a30a6219e/setup.py) egg_info for package yxcompgen
2024-10-20T19:39:53,711   Created temporary directory: /tmp/pip-pip-egg-info-cy1ubx4i
2024-10-20T19:39:53,711   Preparing metadata (setup.py): started
2024-10-20T19:39:53,712   Running command python setup.py egg_info
2024-10-20T19:39:54,259   Traceback (most recent call last):
2024-10-20T19:39:54,260     File "<string>", line 2, in <module>
2024-10-20T19:39:54,260     File "<pip-setuptools-caller>", line 34, in <module>
2024-10-20T19:39:54,260     File "/tmp/pip-wheel-j3rzekyj/yxcompgen_1026541ad0494f7ebc801a1a30a6219e/setup.py", line 3, in <module>
2024-10-20T19:39:54,260       from yxcompgen.versions import get_versions
2024-10-20T19:39:54,261     File "/tmp/pip-wheel-j3rzekyj/yxcompgen_1026541ad0494f7ebc801a1a30a6219e/yxcompgen/__init__.py", line 1, in <module>
2024-10-20T19:39:54,261       from .src.synteny_block import *
2024-10-20T19:39:54,261     File "/tmp/pip-wheel-j3rzekyj/yxcompgen_1026541ad0494f7ebc801a1a30a6219e/yxcompgen/src/synteny_block.py", line 2, in <module>
2024-10-20T19:39:54,261       from interlap import InterLap
2024-10-20T19:39:54,262   ModuleNotFoundError: No module named 'interlap'
2024-10-20T19:39:54,312   ERROR: python setup.py egg_info exited with 1
2024-10-20T19:39:54,329   [bold magenta]full command[/]: [blue]/usr/bin/python3 -c '
2024-10-20T19:39:54,329   exec(compile('"'"''"'"''"'"'
2024-10-20T19:39:54,329   # This is <pip-setuptools-caller> -- a caller that pip uses to run setup.py
2024-10-20T19:39:54,329   #
2024-10-20T19:39:54,329   # - It imports setuptools before invoking setup.py, to enable projects that directly
2024-10-20T19:39:54,329   #   import from `distutils.core` to work with newer packaging standards.
2024-10-20T19:39:54,329   # - It provides a clear error message when setuptools is not installed.
2024-10-20T19:39:54,329   # - It sets `sys.argv[0]` to the underlying `setup.py`, when invoking `setup.py` so
2024-10-20T19:39:54,329   #   setuptools doesn'"'"'t think the script is `-c`. This avoids the following warning:
2024-10-20T19:39:54,329   #     manifest_maker: standard file '"'"'-c'"'"' not found".
2024-10-20T19:39:54,329   # - It generates a shim setup.py, for handling setup.cfg-only projects.
2024-10-20T19:39:54,329   import os, sys, tokenize
2024-10-20T19:39:54,329   
2024-10-20T19:39:54,329   try:
2024-10-20T19:39:54,329       import setuptools
2024-10-20T19:39:54,329   except ImportError as error:
2024-10-20T19:39:54,329       print(
2024-10-20T19:39:54,329           "ERROR: Can not execute `setup.py` since setuptools is not available in "
2024-10-20T19:39:54,329           "the build environment.",
2024-10-20T19:39:54,329           file=sys.stderr,
2024-10-20T19:39:54,329       )
2024-10-20T19:39:54,329       sys.exit(1)
2024-10-20T19:39:54,329   
2024-10-20T19:39:54,329   __file__ = %r
2024-10-20T19:39:54,329   sys.argv[0] = __file__
2024-10-20T19:39:54,329   
2024-10-20T19:39:54,329   if os.path.exists(__file__):
2024-10-20T19:39:54,329       filename = __file__
2024-10-20T19:39:54,329       with tokenize.open(__file__) as f:
2024-10-20T19:39:54,329           setup_py_code = f.read()
2024-10-20T19:39:54,329   else:
2024-10-20T19:39:54,329       filename = "<auto-generated setuptools caller>"
2024-10-20T19:39:54,329       setup_py_code = "from setuptools import setup; setup()"
2024-10-20T19:39:54,329   
2024-10-20T19:39:54,329   exec(compile(setup_py_code, filename, "exec"))
2024-10-20T19:39:54,329   '"'"''"'"''"'"' % ('"'"'/tmp/pip-wheel-j3rzekyj/yxcompgen_1026541ad0494f7ebc801a1a30a6219e/setup.py'"'"',), "<pip-setuptools-caller>", "exec"))' egg_info --egg-base /tmp/pip-pip-egg-info-cy1ubx4i[/]
2024-10-20T19:39:54,330   [bold magenta]cwd[/]: /tmp/pip-wheel-j3rzekyj/yxcompgen_1026541ad0494f7ebc801a1a30a6219e/
2024-10-20T19:39:54,330   Preparing metadata (setup.py): finished with status 'error'
2024-10-20T19:39:54,331 ERROR: metadata generation failed
2024-10-20T19:39:54,337 Exception information:
2024-10-20T19:39:54,337 Traceback (most recent call last):
2024-10-20T19:39:54,337   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/operations/build/metadata_legacy.py", line 64, in generate_metadata
2024-10-20T19:39:54,337     call_subprocess(
2024-10-20T19:39:54,337   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/utils/subprocess.py", line 209, in call_subprocess
2024-10-20T19:39:54,337     raise error
2024-10-20T19:39:54,337 pip._internal.exceptions.InstallationSubprocessError: python setup.py egg_info exited with 1
2024-10-20T19:39:54,337 
2024-10-20T19:39:54,337 The above exception was the direct cause of the following exception:
2024-10-20T19:39:54,337 
2024-10-20T19:39:54,337 Traceback (most recent call last):
2024-10-20T19:39:54,337   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/cli/base_command.py", line 105, in _run_wrapper
2024-10-20T19:39:54,337     status = _inner_run()
2024-10-20T19:39:54,337   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/cli/base_command.py", line 96, in _inner_run
2024-10-20T19:39:54,337     return self.run(options, args)
2024-10-20T19:39:54,337   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/cli/req_command.py", line 67, in wrapper
2024-10-20T19:39:54,337     return func(self, options, args)
2024-10-20T19:39:54,337   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/commands/wheel.py", line 147, in run
2024-10-20T19:39:54,337     requirement_set = resolver.resolve(reqs, check_supported_wheels=True)
2024-10-20T19:39:54,337   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/resolution/resolvelib/resolver.py", line 95, in resolve
2024-10-20T19:39:54,337     result = self._result = resolver.resolve(
2024-10-20T19:39:54,337   File "/usr/local/lib/python3.9/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 546, in resolve
2024-10-20T19:39:54,337     state = resolution.resolve(requirements, max_rounds=max_rounds)
2024-10-20T19:39:54,337   File "/usr/local/lib/python3.9/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 397, in resolve
2024-10-20T19:39:54,337     self._add_to_criteria(self.state.criteria, r, parent=None)
2024-10-20T19:39:54,337   File "/usr/local/lib/python3.9/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 173, in _add_to_criteria
2024-10-20T19:39:54,337     if not criterion.candidates:
2024-10-20T19:39:54,337   File "/usr/local/lib/python3.9/dist-packages/pip/_vendor/resolvelib/structs.py", line 156, in __bool__
2024-10-20T19:39:54,337     return bool(self._sequence)
2024-10-20T19:39:54,337   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 174, in __bool__
2024-10-20T19:39:54,337     return any(self)
2024-10-20T19:39:54,337   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 162, in <genexpr>
2024-10-20T19:39:54,337     return (c for c in iterator if id(c) not in self._incompatible_ids)
2024-10-20T19:39:54,337   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 53, in _iter_built
2024-10-20T19:39:54,337     candidate = func()
2024-10-20T19:39:54,337   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/resolution/resolvelib/factory.py", line 186, in _make_candidate_from_link
2024-10-20T19:39:54,337     base: Optional[BaseCandidate] = self._make_base_candidate_from_link(
2024-10-20T19:39:54,337   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/resolution/resolvelib/factory.py", line 232, in _make_base_candidate_from_link
2024-10-20T19:39:54,337     self._link_candidate_cache[link] = LinkCandidate(
2024-10-20T19:39:54,337   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 303, in __init__
2024-10-20T19:39:54,337     super().__init__(
2024-10-20T19:39:54,337   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 158, in __init__
2024-10-20T19:39:54,337     self.dist = self._prepare()
2024-10-20T19:39:54,337   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 235, in _prepare
2024-10-20T19:39:54,337     dist = self._prepare_distribution()
2024-10-20T19:39:54,337   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 314, in _prepare_distribution
2024-10-20T19:39:54,337     return preparer.prepare_linked_requirement(self._ireq, parallel_builds=True)
2024-10-20T19:39:54,337   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/operations/prepare.py", line 527, in prepare_linked_requirement
2024-10-20T19:39:54,337     return self._prepare_linked_requirement(req, parallel_builds)
2024-10-20T19:39:54,337   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/operations/prepare.py", line 642, in _prepare_linked_requirement
2024-10-20T19:39:54,337     dist = _get_prepared_distribution(
2024-10-20T19:39:54,337   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/operations/prepare.py", line 72, in _get_prepared_distribution
2024-10-20T19:39:54,337     abstract_dist.prepare_distribution_metadata(
2024-10-20T19:39:54,337   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/distributions/sdist.py", line 69, in prepare_distribution_metadata
2024-10-20T19:39:54,337     self.req.prepare_metadata()
2024-10-20T19:39:54,337   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/req/req_install.py", line 581, in prepare_metadata
2024-10-20T19:39:54,337     self.metadata_directory = generate_metadata_legacy(
2024-10-20T19:39:54,337   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/operations/build/metadata_legacy.py", line 71, in generate_metadata
2024-10-20T19:39:54,337     raise MetadataGenerationFailed(package_details=details) from error
2024-10-20T19:39:54,337 pip._internal.exceptions.MetadataGenerationFailed: metadata generation failed
2024-10-20T19:39:54,346 Removed yxcompgen==0.0.1 from https://files.pythonhosted.org/packages/ec/b8/1bf4a95e66a1ab330d5dce87f5e6809e968c6e3e32ce6d2baf028cb6401f/yxcompgen-0.0.1.tar.gz from build tracker '/tmp/pip-build-tracker-3ulntln0'
2024-10-20T19:39:54,347 Removed build tracker: '/tmp/pip-build-tracker-3ulntln0'