2026-02-06T13:50:11,222 Created temporary directory: /tmp/pip-ephem-wheel-cache-gzsl513y 2026-02-06T13:50:11,225 Created temporary directory: /tmp/pip-build-tracker-h8ghd_31 2026-02-06T13:50:11,225 Initialized build tracking at /tmp/pip-build-tracker-h8ghd_31 2026-02-06T13:50:11,226 Created build tracker: /tmp/pip-build-tracker-h8ghd_31 2026-02-06T13:50:11,227 Entered build tracker: /tmp/pip-build-tracker-h8ghd_31 2026-02-06T13:50:11,228 Created temporary directory: /tmp/pip-wheel-jy1ekps0 2026-02-06T13:50:11,232 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-02-06T13:50:11,235 Created temporary directory: /tmp/pip-ephem-wheel-cache-2v7ni58j 2026-02-06T13:50:11,262 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-02-06T13:50:11,267 2 location(s) to search for versions of pyhmmer: 2026-02-06T13:50:11,267 * https://pypi.org/simple/pyhmmer/ 2026-02-06T13:50:11,267 * https://www.piwheels.org/simple/pyhmmer/ 2026-02-06T13:50:11,268 Fetching project page and analyzing links: https://pypi.org/simple/pyhmmer/ 2026-02-06T13:50:11,269 Getting page https://pypi.org/simple/pyhmmer/ 2026-02-06T13:50:11,270 Found index url https://pypi.org/simple 2026-02-06T13:50:11,577 Fetched page https://pypi.org/simple/pyhmmer/ as application/vnd.pypi.simple.v1+json 2026-02-06T13:50:11,723 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/f8/d9/e06925b2143d7882602b3b2b18b1e39247aa395022acf660f2362e016d75/pyhmmer-0.1.0-cp36-cp36m-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5) 2026-02-06T13:50:11,724 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/42/bb/38717304f0071241dae861805cd3965a635716cd8e209f7a57846beb6bcb/pyhmmer-0.1.0-cp36-cp36m-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5) 2026-02-06T13:50:11,725 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/ed/6f/c31e9586a2f3979939d86281bf3afd2169ebc1d0ae3bd8358a155e4daa3b/pyhmmer-0.1.0-cp37-cp37m-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5) 2026-02-06T13:50:11,726 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/76/3b/d47f0b6a7970a2d1650c565fc73b749b5644da7eb3b7b83ef8f249d10d62/pyhmmer-0.1.0-cp37-cp37m-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5) 2026-02-06T13:50:11,727 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/1d/f7/b44cd4bf143a546fd20c6636a19c0bdf2e9604836b51ea071230303a3fa1/pyhmmer-0.1.0-cp38-cp38-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5) 2026-02-06T13:50:11,728 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/24/70/60653871e1a86e792f3708889fc8acf748365f2244f8667f14c2cbd484a3/pyhmmer-0.1.0-cp38-cp38-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5) 2026-02-06T13:50:11,729 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/0e/15/193379df725ab6ff427b5b8a7318f03aff61a9cfadf125cbbf84a24c7b0f/pyhmmer-0.1.0-cp39-cp39-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5) 2026-02-06T13:50:11,730 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/49/a6/91095e8a9dda7eb3837b166ceb9ceaccee36d4f1d526d070b246760a93f2/pyhmmer-0.1.0-cp39-cp39-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5) 2026-02-06T13:50:11,731 Found link https://files.pythonhosted.org/packages/9e/f3/e9aae8fb601f1e5b98e2c29e0766a7671c6fe151fcf3463162c4fa7aab87/pyhmmer-0.1.0.tar.gz (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5), version: 0.1.0 2026-02-06T13:50:11,732 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/30/5c/720bed5a56da8768db2b94f988b402071729ea2a51911e9dbe3dacb79616/pyhmmer-0.1.1-cp36-cp36m-manylinux1_x86_64.whl (from 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https://files.pythonhosted.org/packages/70/84/88b2f83c69d7e82340c1536321bdd89b504cf1dfc27c13808f477a9e293b/pyhmmer-0.1.1-cp39-cp39-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5) 2026-02-06T13:50:11,739 Found link https://files.pythonhosted.org/packages/36/b4/01720558702134da302c5fbf42308e68eabcd798c8a0cb13f4561086a9aa/pyhmmer-0.1.1.tar.gz (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5), version: 0.1.1 2026-02-06T13:50:11,740 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/6d/b3/e8ec0b0b7254f9e9fd7a12c4ffa8fc60566d74330d66afcde884637ae5d1/pyhmmer-0.1.2-cp36-cp36m-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2026-02-06T13:50:11,741 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/11/59/9256d8c340f272a37741c1df0213d54f762af188af7096ee64e3c10d8f49/pyhmmer-0.1.2-cp36-cp36m-manylinux2010_x86_64.whl (from 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pyhmmer: https://files.pythonhosted.org/packages/40/04/4bdeb1d809ab83f5675c9c9ff0916cec214a8f948963c647af005f6bd38b/pyhmmer-0.1.2-cp38-cp38-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2026-02-06T13:50:11,746 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/0f/8a/0031d0591da9f548894a9c642eea2093a5126607c172653f95b1a9f4e87f/pyhmmer-0.1.2-cp39-cp39-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2026-02-06T13:50:11,746 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/96/a4/6993b2c3f5fbeca7eae8db5be6d295cbda155f167446b39124e6b86d8188/pyhmmer-0.1.2-cp39-cp39-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2026-02-06T13:50:11,747 Found link https://files.pythonhosted.org/packages/cf/c7/e12e012065479815a016011013d76b3b96f4f7f9af43796343615a3931a6/pyhmmer-0.1.2.tar.gz (from 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pyhmmer: https://files.pythonhosted.org/packages/91/08/fde1653784e16bccae316a78694011f0cf56fe74706825db29840d06e087/pyhmmer-0.4.1-cp39-cp39-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2026-02-06T13:50:11,820 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/a9/bd/08e876d81d61cd14279d7cc453060e38df9c59282b389c2789bd7742813b/pyhmmer-0.4.1-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2026-02-06T13:50:11,822 Found link https://files.pythonhosted.org/packages/61/90/4a9c6bf89ac154d48db2cee3bc238d00395d80229e6ac24e6e3b576b5856/pyhmmer-0.4.1.tar.gz (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6), version: 0.4.1 2026-02-06T13:50:11,823 Skipping link: No binaries permitted for pyhmmer: 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https://files.pythonhosted.org/packages/15/c9/ffa040555c4ae3673221436506c8c272c22a53bd9e6a54efe0157d9c2972/pyhmmer-0.4.2-cp39-cp39-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2026-02-06T13:50:11,828 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/cb/06/a2fc008cfdd553285325cf8373f3b6af85bb7cac0e294f45948bf1f282aa/pyhmmer-0.4.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2026-02-06T13:50:11,830 Found link https://files.pythonhosted.org/packages/2f/93/fa15885ede25f87ac2fa5e2cef12831bb8747b7e8455982ca2942ba61c7b/pyhmmer-0.4.2.tar.gz (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6), version: 0.4.2 2026-02-06T13:50:11,831 Skipping link: No binaries permitted for pyhmmer: 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https://files.pythonhosted.org/packages/b3/e2/9bdf705fc5813f94d82ab2dc71ee9f07724caa43629235a845bc6120b5cc/pyhmmer-0.5.0-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2026-02-06T13:50:11,912 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/76/20/0926ec071a4373f167f1c3265c1fe4d2ace1d71e85e6b37bd8a66dd31925/pyhmmer-0.5.0-cp39-cp39-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2026-02-06T13:50:11,913 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/d1/ab/7448d935505b12a4a865f273b51c5e6a63ebacc6d3e98acb23b2133c1c8c/pyhmmer-0.5.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2026-02-06T13:50:11,914 Found link https://files.pythonhosted.org/packages/d4/b4/860e63999b6827d880f4985cae22adc88e92ab2e2b06e954abb60be2d411/pyhmmer-0.5.0.tar.gz (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6), version: 0.5.0 2026-02-06T13:50:11,915 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/83/81/e44ca051aa0c14b3d371da0e11c53b8c97915c587a4d2d8958b761bca739/pyhmmer-0.6.0-cp310-cp310-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2026-02-06T13:50:11,916 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/60/24/ff258c00e8a3d8f9d0f3a34f32f3405bee99ef0339a6fc4d529b6970cc49/pyhmmer-0.6.0-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2026-02-06T13:50:11,917 Skipping link: No binaries permitted for pyhmmer: 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https://files.pythonhosted.org/packages/c6/37/9e560cd8eb371df3b31e9e60b9503b51155607f8ca1948cb4009a0c47519/pyhmmer-0.6.0-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2026-02-06T13:50:11,920 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/b0/85/ec2e8f9b2eb9ac3c6a71f1a9cd29c43ffa2a0bdf23da96dcd6c8135b5a88/pyhmmer-0.6.0-cp38-cp38-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2026-02-06T13:50:11,921 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/b4/6a/8a3467282158fac08ea0dc646378789abe5dfa9e77af5f25a1fb658e3a3e/pyhmmer-0.6.0-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2026-02-06T13:50:11,922 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e1/24/e5cba7b51dc391c8bc45dd7f98e61804088f8cc35346b362dedc94fae471/pyhmmer-0.6.0-cp39-cp39-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2026-02-06T13:50:11,922 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/a0/ad/68a14e424200099462bd97c58fefe3b428a6522ae11b2e2b195bbbd6d15a/pyhmmer-0.6.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2026-02-06T13:50:11,924 Found link https://files.pythonhosted.org/packages/66/34/775e5243113c2d97ae0ed9e6a39f145549bf85c6215840b728fa9a3f6b89/pyhmmer-0.6.0.tar.gz (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6), version: 0.6.0 2026-02-06T13:50:11,925 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/02/87/0d2511754cabbe05b89d15eea01a63f886dcf4697934c121df79b47a281a/pyhmmer-0.6.1-cp310-cp310-macosx_10_15_universal2.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2026-02-06T13:50:11,926 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/89/73/9dcef15dba0a3d194c2efd78a64478d9fe368745a5f76b4d7c321da3929f/pyhmmer-0.6.1-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2026-02-06T13:50:11,926 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/79/34/aaa3d15ef7bd33ef7e8eb8a92ac49e975355f708448e88fe4af98909e4fc/pyhmmer-0.6.1-cp36-cp36m-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2026-02-06T13:50:11,927 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/11/2e/dfd760137a8b144e2341a07ca54ce170a83bd4982641ea31ee90fdfd0837/pyhmmer-0.6.1-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2026-02-06T13:50:11,929 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/2f/63/7c21fe2dfe3cf76c8696fd612327733e3d985161cf70f255937433c3f6aa/pyhmmer-0.6.1-cp37-cp37m-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2026-02-06T13:50:11,929 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/6d/c0/91f4f28744b8b7f90f729b3f06b2732ce1c6fb354e6643585f4d5b9fc5ee/pyhmmer-0.6.1-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2026-02-06T13:50:11,930 Skipping link: No binaries permitted for pyhmmer: 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https://files.pythonhosted.org/packages/27/82/c9dbdf556c27204f3c7452f3dc6360b3d6a5a7a9d139a6dab992a0a33af6/pyhmmer-0.6.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2026-02-06T13:50:11,933 Found link https://files.pythonhosted.org/packages/cd/14/0c156809b9f92d3b0e7af334b0978392f15b2247c4bbb12c16d8f09a05f9/pyhmmer-0.6.1.tar.gz (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6), version: 0.6.1 2026-02-06T13:50:11,934 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/1a/58/bd0cf943e8530a77288c09068655fc165b0c0b8e92c13a504236cef318f4/pyhmmer-0.6.2-cp310-cp310-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2026-02-06T13:50:11,935 Skipping link: No binaries permitted for pyhmmer: 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https://files.pythonhosted.org/packages/23/8a/c9f6d67ff2081be71d5bab224f86dc9fbba04b3a9005d98d1bd4e7abe711/pyhmmer-0.6.3-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2026-02-06T13:50:11,950 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/be/40/6efcf88705d32d27951d1d664a8cbb2d43e7b31afcd44c281b24d02f6f0d/pyhmmer-0.6.3-cp38-cp38-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2026-02-06T13:50:11,951 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/23/4f/5c7b8169544823f5a72bc2c6471a8f0d1f4d009ebab0ed93cef5c1e770cf/pyhmmer-0.6.3-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2026-02-06T13:50:11,951 Skipping link: No binaries permitted for pyhmmer: 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https://files.pythonhosted.org/packages/d7/04/5277c738b8789802cf308662e7eb69535a5dc04d77088937cf749173c7e2/pyhmmer-0.7.0-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2026-02-06T13:50:11,960 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/46/cd/2ae79c367d9ac8df13d62cd7a7c33f8ae37c4b7084886825e616862fc7c3/pyhmmer-0.7.0-cp38-cp38-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2026-02-06T13:50:11,960 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/12/df/5d0e476aab5fa0fa99313e9f2c1d641690381724e8d691a4fe42b7734b6e/pyhmmer-0.7.0-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2026-02-06T13:50:11,961 Skipping link: No binaries permitted for pyhmmer: 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https://files.pythonhosted.org/packages/9f/b1/88afa91956eb78f5b19f3e44fabef47e0bc8bd2028c33c2f1740a2ddf406/pyhmmer-0.7.1-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2026-02-06T13:50:11,970 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/29/a9/acec031f4435e796440521c54f78f978cf91203615c29b07c7c9697840e7/pyhmmer-0.7.1-cp38-cp38-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2026-02-06T13:50:11,971 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/65/16/57009ec67d1b33dc1bddfd40c054d0fa2ed0970c357249b81ca9b2c80ac4/pyhmmer-0.7.1-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2026-02-06T13:50:11,972 Skipping link: No binaries permitted for pyhmmer: 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https://files.pythonhosted.org/packages/62/49/d59f2cc10afaf02538988eae5d76975a0d402a2b641fe161d46a5a3a5b62/pyhmmer-0.7.3-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2026-02-06T13:50:11,997 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/fd/74/2dec67a4756891cf0b45fa2ed3a1ca0d4a06ea3a3064090d20cf0f47e162/pyhmmer-0.7.3-cp38-cp38-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2026-02-06T13:50:11,998 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/04/8a/c3403218b9a93886aa949854a90b7ccf6beff39c85a0f4f722f31811202b/pyhmmer-0.7.3-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2026-02-06T13:50:11,999 Skipping link: No binaries permitted for pyhmmer: 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https://files.pythonhosted.org/packages/70/a0/f5001efc6131cccf6e8e8f53026e28aba2e5effb3a04f131ded183390062/pyhmmer-0.7.3-pp37-pypy37_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2026-02-06T13:50:12,002 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/23/1d/3f8ce18fe6ecd457a3692c313ebbc956f3ff2f0264383e4a5ef8073c20e1/pyhmmer-0.7.3-pp38-pypy38_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2026-02-06T13:50:12,003 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/9b/58/1a70407899294d0acabfefb2ee95027aef14b03fe0501cc5e0673c3896fa/pyhmmer-0.7.3-pp38-pypy38_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2026-02-06T13:50:12,004 Skipping link: No binaries permitted for pyhmmer: 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https://files.pythonhosted.org/packages/56/26/b8f4f0f8c71bf51d30885978636e4281ce8130bf57136d2d048da93ae2a9/pyhmmer-0.7.4-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2026-02-06T13:50:12,012 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/3e/63/5219330ab124df581bc1d23046ff5b43534e606e9bdcf2abfc10a50b62f9/pyhmmer-0.7.4-cp38-cp38-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2026-02-06T13:50:12,013 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/a7/7a/7e3d72b99ff0cede0022113042bc09f911041437a8f80827103b660bcecf/pyhmmer-0.7.4-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2026-02-06T13:50:12,014 Skipping link: No binaries permitted for pyhmmer: 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https://files.pythonhosted.org/packages/e6/29/5a7a4bd1ada554e49d34d8050ae571e5679f80fcae115ae2e4794cfac402/pyhmmer-0.8.0-pp37-pypy37_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2026-02-06T13:50:12,033 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/cd/2e/5a9fdfa2fa8e7896954ae2bdceea262ed56668704d442e7b4a8f2cfca534/pyhmmer-0.8.0-pp38-pypy38_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2026-02-06T13:50:12,034 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/18/64/3883ac90e9e1cd3826a4ba4872af387f914b6879d76cb48e2ccca4d589ed/pyhmmer-0.8.0-pp38-pypy38_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2026-02-06T13:50:12,034 Skipping link: No binaries permitted for pyhmmer: 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https://files.pythonhosted.org/packages/7e/3c/716087c6db3f76b7e4ec3be029f77c00e678af6202187f488274c859ad08/pyhmmer-0.10.12-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2026-02-06T13:50:12,139 Found link https://files.pythonhosted.org/packages/95/39/3e7a069c95b46a960b33733d8c546ff0ab8d8239cbd2f76c7e3d14eab66f/pyhmmer-0.10.12.tar.gz (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6), version: 0.10.12 2026-02-06T13:50:12,140 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/eb/32/76056be2fe24493ce49d1af650e47fe9401d286233ea6ceebdad2d86979c/pyhmmer-0.10.13-cp310-cp310-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2026-02-06T13:50:12,141 Skipping link: No binaries permitted for pyhmmer: 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https://files.pythonhosted.org/packages/d1/49/c9ad8c86a9087e92e83d2fbebf4138bcfd0e55d0d44ea94c51bb09125d24/pyhmmer-0.10.14-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2026-02-06T13:50:12,187 Found link https://files.pythonhosted.org/packages/1e/56/b1df36db1cd4c4d080171d56a800f2490f5f6b33405e7d78c87854ba7522/pyhmmer-0.10.14.tar.gz (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6), version: 0.10.14 2026-02-06T13:50:12,188 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/29/ab/ac9fdd283e36e7bd3bb84688fe7f2b34c60731f2eb9284e29cd6df19fbaa/pyhmmer-0.10.15-cp310-cp310-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6) 2026-02-06T13:50:12,189 Skipping link: No binaries permitted for pyhmmer: 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https://files.pythonhosted.org/packages/71/c6/19e7c009e9c58c1d0d30a47ca0ac0c60ccb9effb62848afa55d53d3a17e3/pyhmmer-0.11.1.tar.gz (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.7), version: 0.11.1 2026-02-06T13:50:12,263 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/fe/53/639cd1997c3ad29e7e19d07fb77eb6813021ef0fa31fc30ae0bcf3d99bf0/pyhmmer-0.11.2-cp310-cp310-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.7) 2026-02-06T13:50:12,264 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/65/6c/ed075beabbdb2d5eb1eb400bc25fec1513a44e4dc986d49096056ac286fd/pyhmmer-0.11.2-cp310-cp310-macosx_11_0_arm64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.7) 2026-02-06T13:50:12,265 Skipping link: No binaries permitted for pyhmmer: 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https://files.pythonhosted.org/packages/e9/c3/ec8fb5fe6e3712708042356724a891da02a59028b9ee98d38f36129d2d35/pyhmmer-0.11.2.tar.gz (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.7), version: 0.11.2 2026-02-06T13:50:12,291 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/1d/b0/c306355b5ada4639da0f79020ff804e0db3916dcc6b4af3438cc2e758405/pyhmmer-0.11.3-cp310-cp310-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.7) 2026-02-06T13:50:12,292 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/b4/25/514365fa0dd6cabf7c6ee76ae770c59a94fbfc6ed0842523c49530c81a77/pyhmmer-0.11.3-cp310-cp310-macosx_11_0_arm64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.7) 2026-02-06T13:50:12,292 Skipping link: No binaries permitted for pyhmmer: 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https://files.pythonhosted.org/packages/6d/1c/d4c0b3074c675aee639088c99dbd5f4a0a6cd19fe75715603fa563f8fbaa/pyhmmer-0.11.3-cp313-cp313-manylinux2014_aarch64.manylinux_2_17_aarch64.manylinux_2_28_aarch64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.7) 2026-02-06T13:50:12,303 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/78/cd/28313f573c57f8129dc3467e35b68a942594cf3c12b03967c6bae7fdd484/pyhmmer-0.11.3-cp313-cp313-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.7) 2026-02-06T13:50:12,304 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/2d/6c/02c697ded8e78208f8af6a0f3a014a99af98f52a8b8fd6c24493f64ff21b/pyhmmer-0.11.3-cp314-cp314-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.7) 2026-02-06T13:50:12,305 Skipping link: No binaries permitted for pyhmmer: 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https://files.pythonhosted.org/packages/1e/91/d4e04af266648ccdc54e369cca108b2ac6a1716e81d2f2fa03bb48b904fd/pyhmmer-0.11.3-cp314-cp314t-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.7) 2026-02-06T13:50:12,311 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/87/fb/3fef80309f4dece4faac25db91bec366939e3a9e0b7d5f2b16d584fbb10b/pyhmmer-0.11.3-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.7) 2026-02-06T13:50:12,312 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/1f/52/cdc90bd69eb66e3478781a83d97c93524e13008ca93c936cb0696df34a0b/pyhmmer-0.11.3-cp38-cp38-macosx_11_0_arm64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.7) 2026-02-06T13:50:12,313 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/8e/f1/138e295ea7348d0e7a94a1ce3bfdfb716f8d602d14dec65f7bbc133aa126/pyhmmer-0.11.3-cp38-cp38-manylinux2014_aarch64.manylinux_2_17_aarch64.manylinux_2_28_aarch64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.7) 2026-02-06T13:50:12,314 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/24/51/3f9a0f8b4da26e12b4f841ff6e31168f8042de2c1aaa0ea8935028facb84/pyhmmer-0.11.3-cp38-cp38-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.7) 2026-02-06T13:50:12,315 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/2a/fc/5e3fe903c1f571c8b591d1f5e22ca52df9ff898172c9138a7ef90c5e6800/pyhmmer-0.11.3-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.7) 2026-02-06T13:50:12,316 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/3c/ae/74f453edaa6660970bde6df2a1b41b8b8130a0b3a054945d812af06c3470/pyhmmer-0.11.3-cp39-cp39-macosx_11_0_arm64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.7) 2026-02-06T13:50:12,316 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/04/7c/152133bfa19b1f51bca36a586e895b9c8ce53d105665ec1a7ce18802cd32/pyhmmer-0.11.3-cp39-cp39-manylinux2014_aarch64.manylinux_2_17_aarch64.manylinux_2_28_aarch64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.7) 2026-02-06T13:50:12,317 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/b7/fd/2941747b5435b6c9e85cf6cf61db0c20aad9f2abfabaa0ef714b86c119f7/pyhmmer-0.11.3-cp39-cp39-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.7) 2026-02-06T13:50:12,318 Found link https://files.pythonhosted.org/packages/15/de/04767b2a6ca9b7fa7229bc0762b90274a5173fc64dad2cd766993caa4803/pyhmmer-0.11.3.tar.gz (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.7), version: 0.11.3 2026-02-06T13:50:12,319 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/26/31/1ec449dfbf1cd3a082dc1fbd0ba60a33b715fe1441c892fa1c9bc1264e16/pyhmmer-0.11.4-cp310-cp310-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.7) 2026-02-06T13:50:12,320 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/af/23/93027aa5f869d8b274330acd21b42d778bc3282f08c4e3b4e8c8d3863967/pyhmmer-0.11.4-cp310-cp310-macosx_11_0_arm64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.7) 2026-02-06T13:50:12,321 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/c1/83/713331c30757b0344d8934883628939946eed1ccfe5478f2c0dddedd6668/pyhmmer-0.11.4-cp310-cp310-manylinux2014_aarch64.manylinux_2_17_aarch64.manylinux_2_28_aarch64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.7) 2026-02-06T13:50:12,322 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/fc/d0/e691daab3641dd6e0fe621b490ffc1ea9928b3cfb4703e55580b53465b5a/pyhmmer-0.11.4-cp310-cp310-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.7) 2026-02-06T13:50:12,323 Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/ec/d3/d2cb958eba018bff96ac14686753942b09efee2355804017679b77006e62/pyhmmer-0.11.4-cp311-cp311-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.7) 2026-02-06T13:50:12,323 Skipping link: No binaries permitted for pyhmmer: 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2026-02-06T13:50:12,385 Found index url https://www.piwheels.org/simple 2026-02-06T13:50:12,582 Fetched page https://www.piwheels.org/simple/pyhmmer/ as text/html 2026-02-06T13:50:12,628 Skipping link: No binaries permitted for pyhmmer: https://www.piwheels.org/simple/pyhmmer/pyhmmer-0.12.0a3-cp312-abi3-linux_armv6l.whl#sha256=0954f677cfb40a0727f46485e97f5dadb6eb5a5c0da107a3606e9f27dd84d222 (from https://www.piwheels.org/simple/pyhmmer/) (requires-python:>=3.7) 2026-02-06T13:50:12,629 Skipping link: No binaries permitted for pyhmmer: https://www.piwheels.org/simple/pyhmmer/pyhmmer-0.12.0a3-cp312-abi3-linux_armv7l.whl#sha256=0954f677cfb40a0727f46485e97f5dadb6eb5a5c0da107a3606e9f27dd84d222 (from https://www.piwheels.org/simple/pyhmmer/) (requires-python:>=3.7) 2026-02-06T13:50:12,630 Skipping link: No binaries permitted for pyhmmer: https://www.piwheels.org/simple/pyhmmer/pyhmmer-0.12.0a2-cp311-cp311-linux_armv6l.whl#sha256=c8c7327315a2c5ff2171899b858def9ee662dfa33e03aa3e8a950c2ede22bc2d (from https://www.piwheels.org/simple/pyhmmer/) (requires-python:>=3.7) 2026-02-06T13:50:12,631 Skipping link: No binaries permitted for pyhmmer: https://www.piwheels.org/simple/pyhmmer/pyhmmer-0.12.0a2-cp311-cp311-linux_armv7l.whl#sha256=c8c7327315a2c5ff2171899b858def9ee662dfa33e03aa3e8a950c2ede22bc2d (from https://www.piwheels.org/simple/pyhmmer/) (requires-python:>=3.7) 2026-02-06T13:50:12,632 Skipping link: No binaries permitted for pyhmmer: https://www.piwheels.org/simple/pyhmmer/pyhmmer-0.12.0a2-cp313-cp313-linux_armv6l.whl#sha256=decda050624d11a8f0ac3a1f5582fbcd9b4e6efaaf3b12cc4ee0a9e81d3f6189 (from https://www.piwheels.org/simple/pyhmmer/) (requires-python:>=3.7) 2026-02-06T13:50:12,633 Skipping link: No binaries permitted for pyhmmer: https://www.piwheels.org/simple/pyhmmer/pyhmmer-0.12.0a2-cp313-cp313-linux_armv7l.whl#sha256=decda050624d11a8f0ac3a1f5582fbcd9b4e6efaaf3b12cc4ee0a9e81d3f6189 (from https://www.piwheels.org/simple/pyhmmer/) (requires-python:>=3.7) 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https://archive1.piwheels.org/simple/pyhmmer/pyhmmer-0.10.0-cp37-cp37m-linux_armv7l.whl#sha256=d3dccbcc605d6187a81a48ed89b005185e14e946e16b01cc495a93a4a4e4893d (from https://www.piwheels.org/simple/pyhmmer/) (requires-python:>=3.6) 2026-02-06T13:50:12,758 Skipping link: No binaries permitted for pyhmmer: https://archive1.piwheels.org/simple/pyhmmer/pyhmmer-0.10.0-cp39-cp39-linux_armv6l.whl#sha256=bc599f2682ac5c067c98071ddc2b813b7f322ee725995f783a9fa338baf42fca (from https://www.piwheels.org/simple/pyhmmer/) (requires-python:>=3.6) 2026-02-06T13:50:12,759 Skipping link: No binaries permitted for pyhmmer: https://archive1.piwheels.org/simple/pyhmmer/pyhmmer-0.10.0-cp39-cp39-linux_armv7l.whl#sha256=bc599f2682ac5c067c98071ddc2b813b7f322ee725995f783a9fa338baf42fca (from https://www.piwheels.org/simple/pyhmmer/) (requires-python:>=3.6) 2026-02-06T13:50:12,760 Skipping link: No binaries permitted for pyhmmer: https://archive1.piwheels.org/simple/pyhmmer/pyhmmer-0.10.0-cp311-cp311-linux_armv6l.whl#sha256=3edd051ab8fc4d4193e94ec5c7ed0aa67ab70b021d3941112113fed2e5b9d771 (from https://www.piwheels.org/simple/pyhmmer/) (requires-python:>=3.6) 2026-02-06T13:50:12,761 Skipping link: No binaries permitted for pyhmmer: https://archive1.piwheels.org/simple/pyhmmer/pyhmmer-0.10.0-cp311-cp311-linux_armv7l.whl#sha256=3edd051ab8fc4d4193e94ec5c7ed0aa67ab70b021d3941112113fed2e5b9d771 (from https://www.piwheels.org/simple/pyhmmer/) (requires-python:>=3.6) 2026-02-06T13:50:12,762 Skipping link: No binaries permitted for pyhmmer: https://www.piwheels.org/simple/pyhmmer/pyhmmer-0.10.0-cp313-cp313-linux_armv6l.whl#sha256=70f9e898623db03908abd3735b2057646e0a9b8dc3b9949ac7fdfe543df4da07 (from https://www.piwheels.org/simple/pyhmmer/) (requires-python:>=3.6) 2026-02-06T13:50:12,763 Skipping link: No binaries permitted for pyhmmer: https://www.piwheels.org/simple/pyhmmer/pyhmmer-0.10.0-cp313-cp313-linux_armv7l.whl#sha256=70f9e898623db03908abd3735b2057646e0a9b8dc3b9949ac7fdfe543df4da07 (from https://www.piwheels.org/simple/pyhmmer/) (requires-python:>=3.6) 2026-02-06T13:50:12,764 Skipping link: not a file: https://www.piwheels.org/simple/pyhmmer/ 2026-02-06T13:50:12,765 Skipping link: not a file: https://pypi.org/simple/pyhmmer/ 2026-02-06T13:50:12,797 Given no hashes to check 1 links for project 'pyhmmer': discarding no candidates 2026-02-06T13:50:12,817 Collecting pyhmmer==0.12.0a4 2026-02-06T13:50:12,820 Created temporary directory: /tmp/pip-unpack-3hvq0jt8 2026-02-06T13:50:13,205 Downloading pyhmmer-0.12.0a4.tar.gz (4.4 MB) 2026-02-06T13:50:16,586 Added pyhmmer==0.12.0a4 from https://files.pythonhosted.org/packages/f5/99/3e395f07b933879d2250a5abfebcadaee535c9b4c9432a266b25f7f7aec7/pyhmmer-0.12.0a4.tar.gz to build tracker '/tmp/pip-build-tracker-h8ghd_31' 2026-02-06T13:50:16,596 Created temporary directory: /tmp/pip-build-env-ufp1r2cr 2026-02-06T13:50:16,601 Installing build dependencies: started 2026-02-06T13:50:16,603 Running command pip subprocess to install build dependencies 2026-02-06T13:50:17,955 Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11) 2026-02-06T13:50:18,759 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-02-06T13:50:18,789 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-02-06T13:50:19,378 Collecting scikit-build-core 2026-02-06T13:50:19,411 Using cached https://www.piwheels.org/simple/scikit-build-core/scikit_build_core-0.11.6-py3-none-any.whl (185 kB) 2026-02-06T13:50:21,751 Collecting cython>=3.0 2026-02-06T13:50:22,802 Using cached https://www.piwheels.org/simple/cython/cython-3.2.4-cp311-cp311-linux_armv7l.whl (11.1 MB) 2026-02-06T13:50:23,803 Collecting packaging>=23.2 2026-02-06T13:50:23,809 Using cached packaging-26.0-py3-none-any.whl (74 kB) 2026-02-06T13:50:23,949 Collecting pathspec>=0.10.1 2026-02-06T13:50:23,956 Using cached pathspec-1.0.4-py3-none-any.whl (55 kB) 2026-02-06T13:50:27,387 Installing collected packages: pathspec, packaging, cython, scikit-build-core 2026-02-06T13:50:32,815 Creating /tmp/pip-build-env-ufp1r2cr/overlay/local/bin 2026-02-06T13:50:32,818 changing mode of /tmp/pip-build-env-ufp1r2cr/overlay/local/bin/cygdb to 755 2026-02-06T13:50:32,820 changing mode of /tmp/pip-build-env-ufp1r2cr/overlay/local/bin/cython to 755 2026-02-06T13:50:32,824 changing mode of /tmp/pip-build-env-ufp1r2cr/overlay/local/bin/cythonize to 755 2026-02-06T13:50:33,673 Successfully installed cython-3.2.4 packaging-26.0 pathspec-1.0.4 scikit-build-core-0.11.6 2026-02-06T13:50:34,099 Installing build dependencies: finished with status 'done' 2026-02-06T13:50:34,106 Getting requirements to build wheel: started 2026-02-06T13:50:34,108 Running command Getting requirements to build wheel 2026-02-06T13:50:34,896 Getting requirements to build wheel: finished with status 'done' 2026-02-06T13:50:34,900 Created temporary directory: /tmp/pip-modern-metadata-jroeucqv 2026-02-06T13:50:34,904 Preparing metadata (pyproject.toml): started 2026-02-06T13:50:34,906 Running command Preparing metadata (pyproject.toml) 2026-02-06T13:50:35,751 2026-02-06 13:50:35,751 - scikit_build_core - WARNING - Unknown keys in top-level of pyproject.toml: tool.mypy-pyhmmer.tests.* 2026-02-06T13:50:35,812 *** scikit-build-core 0.11.6 using CMake 3.25.1 (metadata_wheel) 2026-02-06T13:50:35,961 Preparing metadata (pyproject.toml): finished with status 'done' 2026-02-06T13:50:35,968 Source in /tmp/pip-wheel-jy1ekps0/pyhmmer_a0fb25dfe9d84a298c7f1755798df2ee has version 0.12.0a4, which satisfies requirement pyhmmer==0.12.0a4 from https://files.pythonhosted.org/packages/f5/99/3e395f07b933879d2250a5abfebcadaee535c9b4c9432a266b25f7f7aec7/pyhmmer-0.12.0a4.tar.gz 2026-02-06T13:50:35,969 Removed pyhmmer==0.12.0a4 from https://files.pythonhosted.org/packages/f5/99/3e395f07b933879d2250a5abfebcadaee535c9b4c9432a266b25f7f7aec7/pyhmmer-0.12.0a4.tar.gz from build tracker '/tmp/pip-build-tracker-h8ghd_31' 2026-02-06T13:50:35,982 Created temporary directory: /tmp/pip-unpack-aow1ujor 2026-02-06T13:50:35,983 Building wheels for collected packages: pyhmmer 2026-02-06T13:50:35,989 Created temporary directory: /tmp/pip-wheel-eadtm325 2026-02-06T13:50:35,989 Destination directory: /tmp/pip-wheel-eadtm325 2026-02-06T13:50:35,996 Building wheel for pyhmmer (pyproject.toml): started 2026-02-06T13:50:35,998 Running command Building wheel for pyhmmer (pyproject.toml) 2026-02-06T13:50:36,803 2026-02-06 13:50:36,803 - scikit_build_core - WARNING - Unknown keys in top-level of pyproject.toml: tool.mypy-pyhmmer.tests.* 2026-02-06T13:50:36,863 *** scikit-build-core 0.11.6 using CMake 3.25.1 (wheel) 2026-02-06T13:50:36,905 *** Configuring CMake... 2026-02-06T13:50:37,029 loading initial cache file build/Release/CMakeInit.txt 2026-02-06T13:50:37,378 -- The C compiler identification is GNU 12.2.0 2026-02-06T13:50:37,448 -- Detecting C compiler ABI info 2026-02-06T13:50:37,787 -- Detecting C compiler ABI info - done 2026-02-06T13:50:37,830 -- Check for working C compiler: /usr/bin/arm-linux-gnueabihf-gcc - skipped 2026-02-06T13:50:37,833 -- Detecting C compile features 2026-02-06T13:50:37,836 -- Detecting C compile features - done 2026-02-06T13:50:37,851 -- Try NEON C flag = [ ] 2026-02-06T13:50:37,852 -- Performing Test HAVE_NEON 2026-02-06T13:50:38,548 -- Performing Test HAVE_NEON - Failed 2026-02-06T13:50:38,550 -- Try NEON C flag = [-mfpu=neon] 2026-02-06T13:50:38,551 -- Performing Test HAVE_NEON 2026-02-06T13:50:39,371 -- Performing Test HAVE_NEON - Success 2026-02-06T13:50:39,378 -- Found NEON: -mfpu=neon 2026-02-06T13:50:39,382 -- Try SSE2 C flag = [ ] 2026-02-06T13:50:39,383 -- Performing Test HAVE_SSE2 2026-02-06T13:50:39,575 -- Performing Test HAVE_SSE2 - Failed 2026-02-06T13:50:39,578 -- Try SSE2 C flag = [-msse2] 2026-02-06T13:50:39,579 -- Performing Test HAVE_SSE2 2026-02-06T13:50:39,724 -- Performing Test HAVE_SSE2 - Failed 2026-02-06T13:50:39,726 -- Try SSE2 C flag = [-msse2 -msimd128] 2026-02-06T13:50:39,727 -- Performing Test HAVE_SSE2 2026-02-06T13:50:39,884 -- Performing Test HAVE_SSE2 - Failed 2026-02-06T13:50:39,887 -- Try SSE2 C flag = [-march=core2] 2026-02-06T13:50:39,888 -- Performing Test HAVE_SSE2 2026-02-06T13:50:40,033 -- Performing Test HAVE_SSE2 - Failed 2026-02-06T13:50:40,040 -- Could NOT find SSE2 (missing: SSE2_C_FLAGS) 2026-02-06T13:50:40,043 -- Try SSE4 C flag = [ ] 2026-02-06T13:50:40,044 -- Performing Test HAVE_SSE4 2026-02-06T13:50:40,230 -- Performing Test HAVE_SSE4 - Failed 2026-02-06T13:50:40,232 -- Try SSE4 C flag = [-msse4.1 -msimd128] 2026-02-06T13:50:40,233 -- Performing Test HAVE_SSE4 2026-02-06T13:50:40,386 -- Performing Test HAVE_SSE4 - Failed 2026-02-06T13:50:40,388 -- Try SSE4 C flag = [-msse4.1] 2026-02-06T13:50:40,389 -- Performing Test HAVE_SSE4 2026-02-06T13:50:40,532 -- Performing Test HAVE_SSE4 - Failed 2026-02-06T13:50:40,533 -- Try SSE4 C flag = [-msse4] 2026-02-06T13:50:40,534 -- Performing Test HAVE_SSE4 2026-02-06T13:50:40,671 -- Performing Test HAVE_SSE4 - Failed 2026-02-06T13:50:40,677 -- Could NOT find SSE4 (missing: SSE4_C_FLAGS) 2026-02-06T13:50:40,681 -- Try VMX C flag = [ ] 2026-02-06T13:50:40,682 -- Performing Test HAVE_VMX 2026-02-06T13:50:40,871 -- Performing Test HAVE_VMX - Failed 2026-02-06T13:50:40,877 -- Could NOT find VMX (missing: VMX_C_FLAGS) 2026-02-06T13:50:40,878 -- Installing shared libraries to pyhmmer.libs 2026-02-06T13:50:40,895 -- Looking for stdio.h 2026-02-06T13:50:41,267 -- Looking for stdio.h - found 2026-02-06T13:50:41,269 -- Looking for stdlib.h 2026-02-06T13:50:41,659 -- Looking for stdlib.h - found 2026-02-06T13:50:41,661 -- Looking for string.h 2026-02-06T13:50:42,242 -- Looking for string.h - found 2026-02-06T13:50:42,245 -- Looking for inttypes.h 2026-02-06T13:50:42,604 -- Looking for inttypes.h - found 2026-02-06T13:50:42,606 -- Looking for stdint.h 2026-02-06T13:50:42,997 -- Looking for stdint.h - found 2026-02-06T13:50:43,000 -- Looking for strings.h 2026-02-06T13:50:43,352 -- Looking for strings.h - found 2026-02-06T13:50:43,355 -- Looking for sys/stat.h 2026-02-06T13:50:43,730 -- Looking for sys/stat.h - found 2026-02-06T13:50:43,732 -- Looking for sys/types.h 2026-02-06T13:50:44,334 -- Looking for sys/types.h - found 2026-02-06T13:50:44,337 -- Looking for unistd.h 2026-02-06T13:50:44,704 -- Looking for unistd.h - found 2026-02-06T13:50:44,706 -- Looking for endian.h 2026-02-06T13:50:45,077 -- Looking for endian.h - found 2026-02-06T13:50:45,079 -- Looking for netinet/in.h 2026-02-06T13:50:45,493 -- Looking for netinet/in.h - found 2026-02-06T13:50:45,496 -- Looking for sys/param.h 2026-02-06T13:50:46,273 -- Looking for sys/param.h - found 2026-02-06T13:50:46,275 -- Looking for sys/sysctl.h 2026-02-06T13:50:46,470 -- Looking for sys/sysctl.h - not found 2026-02-06T13:50:46,472 -- Looking for aligned_alloc 2026-02-06T13:50:46,819 -- Looking for aligned_alloc - found 2026-02-06T13:50:46,821 -- Looking for erfc 2026-02-06T13:50:47,189 -- Looking for erfc - not found 2026-02-06T13:50:47,191 -- Looking for getpid 2026-02-06T13:50:47,750 -- Looking for getpid - found 2026-02-06T13:50:47,751 -- Looking for _mm_malloc 2026-02-06T13:50:48,128 -- Looking for _mm_malloc - not found 2026-02-06T13:50:48,130 -- Looking for popen 2026-02-06T13:50:48,480 -- Looking for popen - found 2026-02-06T13:50:48,483 -- Looking for posix_memalign 2026-02-06T13:50:48,832 -- Looking for posix_memalign - found 2026-02-06T13:50:48,834 -- Looking for strcasecmp 2026-02-06T13:50:49,192 -- Looking for strcasecmp - found 2026-02-06T13:50:49,194 -- Looking for strsep 2026-02-06T13:50:49,551 -- Looking for strsep - found 2026-02-06T13:50:49,553 -- Looking for sysconf 2026-02-06T13:50:49,891 -- Looking for sysconf - found 2026-02-06T13:50:49,893 -- Looking for sysctl 2026-02-06T13:50:50,468 -- Looking for sysctl - not found 2026-02-06T13:50:50,470 -- Looking for times 2026-02-06T13:50:51,037 -- Looking for times - found 2026-02-06T13:50:51,039 -- Looking for fseeko 2026-02-06T13:50:51,387 -- Looking for fseeko - found 2026-02-06T13:50:52,705 -- Found Python: /usr/bin/python3 (found version "3.11.2") found components: Interpreter Development.Module 2026-02-06T13:50:52,710 -- Looking for PyInterpreterState_GetID 2026-02-06T13:50:53,371 -- Looking for PyInterpreterState_GetID - not found 2026-02-06T13:50:53,375 -- Building in latest API mode for Python: 3.11 2026-02-06T13:50:53,378 -- Building in latest API mode for Python: 3.11 2026-02-06T13:50:53,382 -- Building in latest API mode for Python: 3.11 2026-02-06T13:50:53,386 -- Building in latest API mode for Python: 3.11 2026-02-06T13:50:53,391 -- Configuring done 2026-02-06T13:50:53,656 -- Generating done 2026-02-06T13:50:53,764 -- Build files have been written to: /tmp/pip-wheel-jy1ekps0/pyhmmer_a0fb25dfe9d84a298c7f1755798df2ee/build/Release 2026-02-06T13:50:53,822 *** Building project with Ninja... 2026-02-06T13:50:54,008 ninja: error: 'src/easel/DEPENDS_EXPLICIT_ONLY', needed by '/tmp/pip-wheel-jy1ekps0/pyhmmer_a0fb25dfe9d84a298c7f1755798df2ee/build/Release/src/easel/easel.c', missing and no known rule to make it 2026-02-06T13:50:54,030 *** CMake build failed 2026-02-06T13:50:54,117 ERROR: [present-rich] Building wheel for pyhmmer (pyproject.toml) exited with 1 2026-02-06T13:50:54,131 [bold magenta]full command[/]: [blue]/usr/bin/python3 /usr/lib/python3/dist-packages/pip/_vendor/pyproject_hooks/_in_process/_in_process.py build_wheel /tmp/tmpyj1f5q1i[/] 2026-02-06T13:50:54,132 [bold magenta]cwd[/]: /tmp/pip-wheel-jy1ekps0/pyhmmer_a0fb25dfe9d84a298c7f1755798df2ee 2026-02-06T13:50:54,133 Building wheel for pyhmmer (pyproject.toml): finished with status 'error' 2026-02-06T13:50:54,136 ERROR: Failed building wheel for pyhmmer 2026-02-06T13:50:54,139 Failed to build pyhmmer 2026-02-06T13:50:54,141 ERROR: Failed to build one or more wheels 2026-02-06T13:50:54,142 Exception information: 2026-02-06T13:50:54,142 Traceback (most recent call last): 2026-02-06T13:50:54,142 File "/usr/lib/python3/dist-packages/pip/_internal/cli/base_command.py", line 160, in exc_logging_wrapper 2026-02-06T13:50:54,142 status = run_func(*args) 2026-02-06T13:50:54,142 ^^^^^^^^^^^^^^^ 2026-02-06T13:50:54,142 File "/usr/lib/python3/dist-packages/pip/_internal/cli/req_command.py", line 247, in wrapper 2026-02-06T13:50:54,142 return func(self, options, args) 2026-02-06T13:50:54,142 ^^^^^^^^^^^^^^^^^^^^^^^^^ 2026-02-06T13:50:54,142 File "/usr/lib/python3/dist-packages/pip/_internal/commands/wheel.py", line 201, in run 2026-02-06T13:50:54,142 raise CommandError("Failed to build one or more wheels") 2026-02-06T13:50:54,142 pip._internal.exceptions.CommandError: Failed to build one or more wheels 2026-02-06T13:50:54,147 Removed build tracker: '/tmp/pip-build-tracker-h8ghd_31'